KEGG   Prunus mume (Japanese apricot): 103319161
Entry
103319161         CDS       T03196                                 
Name
(RefSeq) protein RAE1
  KO
K14298  mRNA export factor
Organism
pmum  Prunus mume (Japanese apricot)
Pathway
pmum03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:pmum00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    103319161
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pmum03019]
    103319161
   03036 Chromosome and associated proteins [BR:pmum03036]
    103319161
Messenger RNA biogenesis [BR:pmum03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     103319161
Chromosome and associated proteins [BR:pmum03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    103319161
SSDB
Motif
Pfam: Beta-prop_THOC3 WD40 WD40_Prp19 Beta-prop_WDR3_1st Beta-prop_WDR5 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 WDR55 Beta-prop_WDR3_2nd Beta-prop_RIG_2nd Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_EML Beta-prop_WDR36-Utp21_2nd WD40_Gbeta EIF3I ANAPC4_WD40 Beta-prop_TEP1_C Beta-prop_DCAF12 Beta-prop_CAF1B_HIR1 Beta-prop_HPS5 Beta-prop_Aladin Beta-prop_ACSF4 Beta-prop_SPT8 Beta-prop_EIPR1 WD40_MABP1-WDR62_2nd Beta-prop_IFT122_1st Beta-prop_WDR75_2nd WD40_RFWD3 Beta-prop_WDR75_1st WD40_MABP1-WDR62_1st Beta-prop_BBS7
Other DBs
NCBI-GeneID: 103319161
NCBI-ProteinID: XP_008218895
UniProt: A0ABM0N3B1
LinkDB
Position
LG2:complement(2387454..2392992)
AA seq 353 aa
MSNFMAAANANANSNPNPNANKSFEVAQPPNDSISSLSFSPKSNILVATSWDNQVRCWEI
HQSGTNLASQPKAAISHEHPVLCSTWKEDGTTVFSGGCDKQVKMWPLGGQPVTVAMHDAP
ITEIVWIPEMSLLVTGSWDKTLKYWDVRQPNPVHTQQLPERCYALSVRYPLMVVGTADRN
LVVFNLQNPQTEFKRIVSPLKYQTRCVAAFPDQQGFLVGSIEGRVGVHHLDEQQQNKNFT
FKCHREGSEIYSVNSLNFHPVHHTFTTAGSDGSFNFWDKDSKQRLKAMSRCNQPIPCSTF
NNDGSIFAYAVCYDWSKGAENHNPATAKNYIFLHLPQEAEVKSKPRVNTGGKR
NT seq 1062 nt   +upstreamnt  +downstreamnt
atgtcgaatttcatggctgctgcaaatgcaaatgcaaattcaaatccaaatccaaatgca
aacaagtcctttgaggtcgctcaacctccaaacgactccatatcaagcctaagtttcagt
cccaagagcaacattctggtcgccacctcctgggacaaccaggtgcgatgctgggagata
caccagagcggaacaaatcttgccagtcagcccaaggcagcgatatcccatgaacatccg
gttttgtgctcaacttggaaagaggatggaacgactgtgttctctggaggttgcgacaag
caagttaagatgtggcctttgggtggccagccagtaactgttgccatgcatgatgcaccc
attacagagattgtttggatccctgagatgagcctcttagtcacaggaagctgggacaag
actttgaagtattgggatgtgaggcagccaaatccagtgcatacccaacaactacctgag
cgctgctatgctctatcagtgcgataccccctaatggttgttggcactgcagacagaaat
ctggtcgtttttaacttgcagaacccacagactgaattcaagagaattgtttcgccccta
aagtatcaaacaaggtgtgttgctgcatttcctgatcagcaaggattcttggtcggctct
attgaagggagggttggcgtacatcatctggatgaacaacaacaaaataaaaactttacc
tttaagtgccatagagagggcagcgagatatactcagtcaactctctgaacttccatcca
gtgcatcacacatttactactgctggttccgatggttctttcaatttttgggataaggat
agcaaacagagactgaaggcaatgtcaaggtgcaatcaacctataccttgcagtacattc
aacaatgatggttccatatttgcatatgcggtttgctatgattggagcaagggtgcagaa
aatcataatccagctaccgcaaagaactacattttcctccatttgccacaggaagccgag
gttaaaagcaaaccacgagttaacactggtggaaaaaggtga

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