Prunus mume (Japanese apricot): 103319191
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Entry
103319191 CDS
T03196
Name
(RefSeq) E3 ubiquitin-protein ligase RNF170
KO
K15707
E3 ubiquitin-protein ligase RNF170 [EC:
2.3.2.27
]
Organism
pmum
Prunus mume (Japanese apricot)
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pmum04121
]
103319191
Enzymes [BR:
pmum01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
103319191
Ubiquitin system [BR:
pmum04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
103319191
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1232
RING_XB3-XBAT31
zf-C3HC4_3
zf-C3HC4
zf-RING_UBOX
zf-RING_2
zf-C3HC4_4
zf-RING_5
zf-RING_13
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
103319191
NCBI-ProteinID:
XP_008218936
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All DBs
Position
LG2:complement(2670349..2675647)
Genome browser
AA seq
185 aa
AA seq
DB search
MDDPPGSDMCSVCHGNFDTPCQANCSHWFCGNCIMLVWHHGSALQPCKCPLCRRYITLLV
PSEASLRQADRPEVAEILGKVERYNRYFGDHHRSLIQRGQDLPFFLRRLLRELIDPNRSL
PPRRMAQICFAMILLAIYLVSPVDLIPEAIFGLLGYVDDFIVALVILFNLAAISRSILYH
RHGGS
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atggacgatcctccaggcagcgatatgtgctcggtctgccatggcaacttcgacactcct
tgtcaagccaattgttctcactggttttgtggaaattgtattatgcttgtttggcatcat
ggatcagcacttcagccttgtaaatgcccactatgccgtcgttatatcactttgttggtt
ccaagtgaggcttcattaaggcaggctgacagaccagaggtggctgagattctaggcaaa
gttgaaaggtacaatcgttattttggagatcatcacagaagtcttattcagagagggcag
gaccttccttttttcctgcggaggctgctgcgagaactaattgatcctaatagatctctt
cctcctcgtaggatggctcagatctgttttgcaatgatattgttagcaatctacctagtc
agtcctgttgaccttattccggaagcaatctttggtttacttggttatgtggatgatttc
atcgtggcgctcgtcatcttgtttaatcttgctgccatttctcggtcgatactctatcac
cgtcatggaggttcctga
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