Prunus mume (Japanese apricot): 103319193
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Entry
103319193 CDS
T03196
Name
(RefSeq) probable U3 small nucleolar RNA-associated protein 7
KO
K14768
U3 small nucleolar RNA-associated protein 7
Organism
pmum
Prunus mume (Japanese apricot)
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pmum03009
]
103319193
Ribosome biogenesis [BR:
pmum03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
103319193
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BING4CT
WD40_Prp19
Beta-prop_THOC3
Beta-prop_EML_2
Beta-prop_WDR5
WD40_CDC20-Fz
Beta-prop_WDR3_1st
WD40
Beta-prop_WDR36-Utp21_1st
WD40_WDHD1_1st
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_EML
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
EIF3I
WDR55
Beta-prop_IFT140_1st
Beta-prop_VPS8
Beta-prop_Aladin
Beta-prop_HPS5
WD40_MABP1-WDR62_2nd
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
WDR90_beta-prop_4th
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Cytochrom_D1
Motif
Other DBs
NCBI-GeneID:
103319193
NCBI-ProteinID:
XP_008218938
UniProt:
A0ABM0N3F0
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Position
LG2:2688071..2694318
Genome browser
AA seq
537 aa
AA seq
DB search
MGVKQDDGSIMPTSEQEKISDELDIRVKKFLRGEKTNLEGLQDKKLKGQLAVREELFGKS
AQAAAKAEKWLLPSEGGYLEAEGIEKTWRIKQESIAREVDILSARSQYDIVLPDLGPYTL
DFTSSGRYMAAGGRKGHLAILDMKNMSLVKEIQVRETVRDVVFLHNELFFAAAQKKYPYI
YNRDGTELHCLKEHGAVLRLQFLKNHFLLASINKSGQLRYQDVTMGGMVANYRTGLGRTD
VMQVNPYNGVVALGHSLGTVSMWKPTSSTALLKRLCHKGPITAMAFHPNGHLMATAGKEK
KIMLWDLRNLKDEPLQTLPGNADTLDFSQKGLLARSTSSFVQILRDSSGTQNYNNYMTHK
IIKGYQVEKVLFRPYEDVLGIGHSMGWSSILIPGSGEPNFDSWVANPFETSKQRREREVH
SLLDKLPPETIMLNPTKIGTVKPQRRKEKKTKEEKEADMEAAVEAVKGIEPKKKTKGRNK
PSKRTKKKQEIVANAKRPFLEQQKKEEEQVARKKQKVIEQVELPTSLQRFSRKKSAT
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtgaaacaagacgatggcagtattatgcctacatctgaacaggagaagatctct
gatgagttagatatcagagtgaagaagtttcttagaggcgaaaaaactaatttggagggc
ttgcaagataaaaaattgaagggtcaacttgctgttagagaagaattgtttggaaaatct
gcacaagctgctgccaaggctgagaagtggcttctgccaagtgagggaggctatttggag
gctgaaggcatagagaaaacatggaggatcaaacaagaatcaattgctcgtgaagtagat
atcttaagcgcaaggagtcaatatgatattgtcttaccagatcttggtccttacacactg
gatttcacctcaagtggtcggtatatggcagctggtggacgcaagggccatctggctatt
ttagacatgaagaatatgagcctggttaaagaaattcaggttagagaaacagtgcgtgat
gtggtgttcttgcacaatgagttgttctttgctgctgcccagaaaaagtatccatatatt
tataacagggatggcactgaacttcattgcttaaaggaacatggcgcagtattaaggctt
caatttttgaaaaaccattttctcttggcatcaataaacaaatctgggcagcttcgttat
caggatgtaacaatgggcgggatggtagctaattacaggactggcttaggccgtaccgat
gtgatgcaggtgaacccctacaatggggttgttgctttgggtcattcacttggtacagtt
tccatgtggaagcccacaagctctactgctcttctcaagaggctgtgtcacaaggggccc
atcacggcaatggcattccacccaaatggccatctcatggctacagctgggaaagagaag
aaaattatgctttgggatttgaggaaccttaaggatgagccactccagactttgccgggg
aatgcagatactcttgatttcagtcagaaaggtctgcttgctcgttcaacttcatcattt
gtacagatccttagagattcatctgggactcagaactacaataattatatgactcataaa
ataattaaaggttaccaagtagaaaaagtgttgtttcgaccttatgaagatgttctcggc
attgggcactccatggggtggtctagtattctgattcctggttctggggaacccaacttt
gattcttgggtggctaatccatttgaaacatctaaacagagaagagagagggaagtgcac
tctctacttgataagctcccgcctgagacaatcatgttgaatcccacaaagattggcaca
gtaaagcctcaaaggaggaaagagaagaaaacaaaggaggagaaagaggccgacatggaa
gccgctgtggaagcggtcaagggcattgaaccaaagaagaaaacaaaaggaaggaataag
ccgagtaagaggacaaagaagaagcaggagatagttgcgaatgccaagaggcctttcttg
gagcaacaaaagaaagaggaagaacaagtggctaggaagaagcagaaagtaattgagcaa
gtggagctaccaacatctttgcagcggttttctcgcaagaaatcagctacatag
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