Prunus mume (Japanese apricot): 103319324
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Entry
103319324 CDS
T03196
Name
(RefSeq) ribosome biogenesis protein BMS1 homolog
KO
K14569
ribosome biogenesis protein BMS1
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
103319324
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pmum03009
]
103319324
Ribosome biogenesis [BR:
pmum03009
]
Eukaryotic type
90S particles
GTPase
103319324
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RIBIOP_C
AARP2CN
GTP_EFTU
Tsr1_G-like
AAA
AAA_22
AAA_16
MMR_HSR1
RNA_helicase
Motif
Other DBs
NCBI-GeneID:
103319324
NCBI-ProteinID:
XP_008219075
UniProt:
A0ABM0N3N5
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All DBs
Position
LG2:complement(3403005..3413165)
Genome browser
AA seq
1203 aa
AA seq
DB search
MAIDSGTKEQSHKEHRSRQSGSKADKKKRDASSQSGKKQNPKAFAFSSTVKAKRLQSRSV
EKEQRRLHVPTIDRSYGEQPPYVVLVHGPPKVGKSLLIKSLVKHYTKHNLPEVRGPITIV
SGKQRRVQFVECPNDINGMIDAAKFADLALLLIDGSYGFEMETFEFLNILQVHGFPKVMG
VLTHLDKFKDVKKLKKTKQHLKHRFWNEIYDGAKLFYLSGLIHGKYVKREIHNLARFISV
MKFHPLSWRTAHPYVLVDRFEDVTPPEKVRLNNKCDRNVTLYGYLRGCNMKKGTKIHIAG
VGDYSLAGMTGLADPCPLPSAAKKKGLRDKEKLFYAPMSGLGDLLYDKDAVYININDHFV
QFSNIDEKGEATNEGKCQDVGVALVKSLQNTKYSVDEKLEESFINLFSWKPNLLSKAQSD
GKDTDESREHIGRIKSFEEYQSGEATKGEGSAEESDAEDFDGSESESSDKNEAAHKDASD
HDATLKDHLKEHVEFHDGRSRRKVIFGNDLDCNDMEDSDLEAEDDGNDNNEDDIHASSGS
ESSEEDEDIHETDDEMGNIAKWKESLVERTSSRQIINLMQLVYGKSTSTQATSINEEHDG
SADDESDGDDFFKPKGEGNKKHGGIEGGNWNVEDCSKFTNYSNLKDWKEEKLREGIRDRF
VTGDWSKASQRNQAAEAKVEDDDAVYGDFEDLETGEKHDGNHSDDASNDANHKEDDLAKE
ERRLKKLALRAKFDAQFDGAESSEEELENKHKGKFGRDQSKESGYFDKLKDEIELRKQMN
ISELNDLDEATRLEIEGFRTGTYLRLEVHDVPYEMVEYFDPCHPILIGGIGLGEENVGHM
QARLKRHRWHKKVLKTSDPIIVSIGWRRYQTIPVYAIEDRNGRHRMLKYTPEHMHCLAMF
WGPLAPPNTGVVAFQNLSNNQVQFRITATAVVLEFNHASRIVKKLKLVGHPCKIFKNTAL
VKDMFTSDLEIARFEGAAVRTVSGIRGQVKKAAKEEIGNQPKKMGGQPKEGIARCTFEDK
IKMSDIVFLRAWTQVEVPQFYNPLTTSLQPRDKTWQGMKTTAELRREHNIPIPVNKDSLY
KPIERKLKKFNPLVIPKSLQAALPFASKPKDIRSRGRPLLENRRAVVMEPHERKVHALVQ
HLRLIRNEKIKKRKLKDEKKRKEIEVQKAKEEQLSKNRQREERRERYREQDKLKKKIRRN
AED
NT seq
3612 nt
NT seq
+upstream
nt +downstream
nt
atggccatagatagcggaactaaggagcagtcgcacaaggaacataggtccaggcagtcg
ggttccaaggccgacaagaagaagcgtgacgcttcttcccaaagcggcaagaagcaaaac
ccaaaggcatttgcttttagctcaactgtgaaagccaagcgtcttcaatcccgctccgtc
gagaaagagcagcgcaggcttcatgtcccaaccattgatcgttcctatggcgaacaacct
ccatatgttgttctggtgcatggacctcccaaggttggcaagtctttgttgattaagtct
cttgtaaagcattataccaagcataatttaccggaggttcgaggcccgattaccattgtt
tcagggaagcaaaggcgggtgcagtttgtggagtgcccaaatgatatcaatggtatgatt
gatgctgcaaagtttgctgatttagcactacttctaattgacggaagctatggttttgaa
atggagacatttgaattcctgaacatattgcaagttcatggcttcccaaaggttatggga
gttcttactcaccttgacaagtttaaagatgtaaagaaattgaagaaaacaaagcagcac
ctcaaacatcgtttctggaatgaaatatatgatggagctaaattgttttatttatctggt
ctcattcatggaaagtatgtcaaacgtgaaattcacaatctggcacgtttcatatctgtt
atgaagttccatcctttatcttggcgaactgctcatccttatgttttagtagatcgtttt
gaagatgtcactcctcctgaaaaagtgcgtttgaataataaatgcgatagaaatgtcaca
ctgtacggttatttgcggggctgtaacatgaaaaaaggaacaaagattcatattgcaggt
gttggggattacagtttagctggtatgacaggcttagctgatccttgtcccttaccctca
gctgccaaaaagaagggactgcgtgataaggaaaaattgttttatgcacccatgtctgga
cttggggatctcctgtatgataaagatgctgtctatataaacataaatgaccactttgtc
cagttttccaacattgatgaaaagggtgaagcaacaaatgaaggcaagtgccaagatgtg
ggtgtggctttggtaaaatctcttcagaacacaaaatattcagttgatgaaaagttagag
gagagcttcattaatctatttagttggaagcctaatttattgtcaaaggctcaaagtgat
ggaaaagatactgatgaatctagagaacatattggtagaataaagtcttttgaggaatat
cagtctggggaagcaaccaaaggtgaaggttctgctgaagaaagtgatgcggaggatttt
gacggttcagaatcagaatcttcagataagaatgaagcagctcataaagatgcatcggat
cacgatgctactcttaaagatcacctgaaggaacatgttgagtttcatgatggaaggtca
aggagaaaagttatctttggaaatgaccttgattgtaacgatatggaggattcagattta
gaggctgaagatgacggcaatgacaacaatgaggatgatattcatgcatcttctggttca
gagtcttcagaggaagatgaagatattcatgaaacagatgatgagatgggaaacattgca
aagtggaaagaatctttggtagaaaggacttcctcaagacaaattattaaccttatgcaa
cttgtatatgggaaatctacatcgacacaagcaacttctatcaatgaagaacatgatggt
agtgcagatgatgaaagtgatggagatgacttttttaagccaaaaggagaaggaaacaag
aaacatggaggaatagaaggcggaaattggaatgttgaggactgttccaaattcacaaat
tattcgaatctcaaagactggaaagaggaaaagcttagggagggtattcgtgatcgtttt
gttactggtgattggtcgaaagcttctcaaagaaatcaagctgctgaggctaaagttgaa
gatgatgacgctgtgtatggtgactttgaagatttagaaactggggagaagcatgatggg
aatcattccgatgatgcaagcaatgatgcaaaccacaaggaagatgatttggccaaagag
gagaggaggctgaaaaagcttgctcttcgtgcaaagtttgatgctcagtttgatggagct
gagtcatctgaagaggagcttgagaataaacacaaaggcaaatttggtagagatcaatcc
aaagaaagtggctattttgacaagctgaaggatgagattgaacttcggaagcaaatgaat
atatctgaactcaatgacctggatgaggccacccgattagagatagagggtttccggaca
gggacttacctaaggttggaggttcatgatgtcccttatgagatggttgaatattttgac
ccctgccatcctattttgattggaggaattggtcttggtgaagaaaatgtcggacacatg
caggccaggttaaagcggcataggtggcacaagaaagtacttaagactagcgatcctatt
attgtttctatcgggtggaggcggtaccaaacaatacctgtttatgctattgaagatcgt
aatggaaggcatcgcatgcttaagtacactcctgaacacatgcattgccttgcaatgttt
tggggccctcttgcccctcctaatactggtgtggttgctttccagaatttatcaaacaat
caggtgcagtttaggatcacagcaactgctgttgtgcttgagttcaaccacgcatcacga
atagtgaagaaactcaaactagttggtcacccctgcaagatcttcaagaacactgcactt
gtaaaagatatgtttacatcagatcttgaaatagctcgatttgaaggagctgctgttcga
actgtcagtggcattcgggggcaggtgaaaaaggctgcaaaagaagaaattggtaaccaa
ccgaaaaagatgggtggacaaccaaaagaagggatagctaggtgcacctttgaggataaa
attaagatgagtgacattgtttttttgcgtgcttggacccaagttgaagttcctcagttt
tacaacccattgacgacatcactgcaacctcgtgataagacctggcaagggatgaaaact
actgctgaattgaggagagaacataatattcctattcctgttaacaaagattcactgtac
aagcccattgaaaggaagctgaagaagttcaacccattggtgattcctaagtcattgcag
gctgctttaccatttgcttcaaagcctaaggatatacgcagtagaggaaggccacttctt
gaaaatagaagagctgttgtcatggaacctcatgaacggaaagttcatgctcttgttcaa
catcttcgattaattagaaatgagaagataaagaagcgcaagctaaaggatgaaaaaaaa
aggaaagaaattgaagtgcagaaagccaaagaagagcaattgtcgaaaaaccgccagaga
gaagaacgacgagagagatatcgggagcaagacaaactgaagaaaaaaatcaggagaaat
gcagaggactga
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