KEGG   Prunus mume (Japanese apricot): 103319328
Entry
103319328         CDS       T03196                                 
Name
(RefSeq) suppressor of mec-8 and unc-52 protein homolog 1
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
pmum  Prunus mume (Japanese apricot)
Brite
KEGG Orthology (KO) [BR:pmum00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pmum03041]
    103319328
Spliceosome [BR:pmum03041]
 Complex B
  Other components
   Complex B specific factors
    103319328
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_THOC3 Beta-prop_IFT122_1st Beta-prop_WDR3_1st WD40_Prp19 WD40_WDHD1_1st EIF3I WDR55 Beta-prop_WDR36-Utp21_2nd WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_WDR3_2nd Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 WD40_Gbeta Beta-prop_EML LisH_TPL NBCH_WD40 WDR90_beta-prop_4th Beta-prop_WDR75_1st Beta-prop_VPS8 Beta-prop_TEP1_C Beta-prop_ACSF4 Beta-prop_NOL10_N Beta-prop_Nup120_160 Beta-prop_Aladin Beta-prop_DCAF4 Beta-prop_Vps41 CFAP251_N Beta-prop_NWD2_C Beta-prop_SCAP Beta-prop_IFT140_1st Ge1_WD40 WD40_MABP1-WDR62_1st DSE1_N Beta-prop_EIPR1 WD40_RFWD3 Beta-prop_NUP159_NUP214 Beta-prop_WDR41 Beta-prop_WDR35_TULP_N ASA1 Beta-prop_SPT8 Beta-prop_WDR75_2nd Beta-prop_HPS5 Beta-prop_CGLA DUF7165 PROPPIN Beta-prop_IP5PC_F Beta-prop_LRRK2 Beta-prop_IFT122_2nd zf_topless VPS11_N 7TMR-HDED
Other DBs
NCBI-GeneID: 103319328
NCBI-ProteinID: XP_008219078
UniProt: A0ABM0N3N8
LinkDB
Position
LG2:3432714..3445585
AA seq 513 aa
MSTLEIEARDVIKIVLQFCKENSLHQTFQTLQSECQVSLNTVDSVETFIADINSGRWDAI
LPQVAQLKLPRNKLEDLYEQIVLEMIELRELDTARAILRQTQVMGVMKQEQPERYLRLEH
LLVRTYFDPNEAYQESTKEKRRAQIAQALAAEVTVVPPSRLMALIGQALKWQQHQGLLPP
GTQFDLFRGTAAMKQDVDDLYPTTLSHTIKFGTKSHAEYARFSPDGQFLISCSMDGFIEV
WDYISGKLKKDLQYQADETFMMHEEAVLCVDFTRDSEMIASGSQDGKIKVWRIRTGQCLR
RLERAHSRGVTSVSFSRDGSQILSTSFDNTARIHGLKSGKLLKEFRGHSYYVNDAIFTSD
GTRVITASSDGTVKVWDLKTTDCLQTFKPPPPLKGTDAAVNSVHLYPKNTDHIIVCNRTS
SIYVMTLQGQVVKSFSSGKKEGGDFLAACVSPKGEWIYCVGEDRNLYCFSNQSGKLEHLM
KVHEKTVIGLTHHPHRNLLATYSEDCTMKLWKP
NT seq 1542 nt   +upstreamnt  +downstreamnt
atgtcgaccttagaaattgaagctcgagatgtcatcaagatcgtgcttcaattttgcaaa
gagaattccttgcaccaaacctttcaaacattacagagtgagtgccaggtttctttgaac
actgtcgacagcgttgagacatttattgctgatataaatagtggaaggtgggatgcaatt
ttgcctcaagtggcccaacttaagcttcccaggaataagttggaggatttgtacgagcag
attgtactggagatgattgaacttcgagaattagatactgctcgtgctatcttaagacaa
actcaggtaatgggtgtaatgaagcaagaacaacctgaaagatacttgcgacttgagcat
ctccttgtcagaacttattttgatccaaatgaggcttatcaagagtcaacgaaagagaag
cggcgtgcacaaattgctcaagcacttgctgcagaagttactgtggtgccaccgtctaga
ttaatggctctaattggtcaggctctaaagtggcagcagcatcaaggattgcttcctccg
ggaacacagtttgacttgtttcggggaacagctgctatgaaacaggatgtagacgacttg
tatccaacaactctttcacacacaataaagtttgggacaaaaagtcatgcagaatatgct
cggttctcaccagatggccagtttcttatctcttgttctatggatgggtttatcgaggta
tgggattacataagtgggaaactcaaaaaggatcttcagtaccaggctgatgaaactttc
atgatgcatgaagaggctgtcctctgtgttgattttacccgagattcagagatgattgct
tctggatcacaagatggaaagatcaaagtttggcgtatcaggactggtcagtgcttgcgc
cgtcttgaacgtgcacattcacggggtgtcaccagcgtttctttctctcgggatggaagc
cagatacttagtacatcatttgacaacactgcaagaatccatggcctaaaatctgggaag
ttgttgaaagaatttcgtggccattcttattatgtaaatgatgcaatatttacgagtgat
ggaactcgtgtaattactgcatctagtgatggcacagtcaaggtctgggatttgaagact
actgactgtctacagacatttaaaccacctcctcctttaaagggaactgatgctgctgtg
aattcagttcatctttacccaaaaaatacggatcacatcattgtatgcaataggacatca
tcaatatatgtcatgacacttcaaggacaggttgtgaagagcttttcatctggtaaaaaa
gaaggtggagattttttggcagcttgtgtgtcaccaaaaggggaatggatttactgtgtt
ggcgaagacaggaatctgtactgtttcagtaatcagtctggcaaattagagcatctaatg
aaggtccatgaaaagacagtaattggcttaactcatcatcctcacaggaatcttctagcc
acatatagtgaagactgcacaatgaagttatggaagccttga

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