Prunus mume (Japanese apricot): 103319328
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Entry
103319328 CDS
T03196
Name
(RefSeq) suppressor of mec-8 and unc-52 protein homolog 1
KO
K13111
WD40 repeat-containing protein SMU1
Organism
pmum
Prunus mume (Japanese apricot)
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pmum03041
]
103319328
Spliceosome [BR:
pmum03041
]
Complex B
Other components
Complex B specific factors
103319328
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Gene cluster
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
LisH_TPL
NBCH_WD40
Nup160
Ge1_WD40
PROPPIN
zf_topless
7TMR-HDED
Motif
Other DBs
NCBI-GeneID:
103319328
NCBI-ProteinID:
XP_008219078
LinkDB
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Position
LG2:3432714..3445585
Genome browser
AA seq
513 aa
AA seq
DB search
MSTLEIEARDVIKIVLQFCKENSLHQTFQTLQSECQVSLNTVDSVETFIADINSGRWDAI
LPQVAQLKLPRNKLEDLYEQIVLEMIELRELDTARAILRQTQVMGVMKQEQPERYLRLEH
LLVRTYFDPNEAYQESTKEKRRAQIAQALAAEVTVVPPSRLMALIGQALKWQQHQGLLPP
GTQFDLFRGTAAMKQDVDDLYPTTLSHTIKFGTKSHAEYARFSPDGQFLISCSMDGFIEV
WDYISGKLKKDLQYQADETFMMHEEAVLCVDFTRDSEMIASGSQDGKIKVWRIRTGQCLR
RLERAHSRGVTSVSFSRDGSQILSTSFDNTARIHGLKSGKLLKEFRGHSYYVNDAIFTSD
GTRVITASSDGTVKVWDLKTTDCLQTFKPPPPLKGTDAAVNSVHLYPKNTDHIIVCNRTS
SIYVMTLQGQVVKSFSSGKKEGGDFLAACVSPKGEWIYCVGEDRNLYCFSNQSGKLEHLM
KVHEKTVIGLTHHPHRNLLATYSEDCTMKLWKP
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaccttagaaattgaagctcgagatgtcatcaagatcgtgcttcaattttgcaaa
gagaattccttgcaccaaacctttcaaacattacagagtgagtgccaggtttctttgaac
actgtcgacagcgttgagacatttattgctgatataaatagtggaaggtgggatgcaatt
ttgcctcaagtggcccaacttaagcttcccaggaataagttggaggatttgtacgagcag
attgtactggagatgattgaacttcgagaattagatactgctcgtgctatcttaagacaa
actcaggtaatgggtgtaatgaagcaagaacaacctgaaagatacttgcgacttgagcat
ctccttgtcagaacttattttgatccaaatgaggcttatcaagagtcaacgaaagagaag
cggcgtgcacaaattgctcaagcacttgctgcagaagttactgtggtgccaccgtctaga
ttaatggctctaattggtcaggctctaaagtggcagcagcatcaaggattgcttcctccg
ggaacacagtttgacttgtttcggggaacagctgctatgaaacaggatgtagacgacttg
tatccaacaactctttcacacacaataaagtttgggacaaaaagtcatgcagaatatgct
cggttctcaccagatggccagtttcttatctcttgttctatggatgggtttatcgaggta
tgggattacataagtgggaaactcaaaaaggatcttcagtaccaggctgatgaaactttc
atgatgcatgaagaggctgtcctctgtgttgattttacccgagattcagagatgattgct
tctggatcacaagatggaaagatcaaagtttggcgtatcaggactggtcagtgcttgcgc
cgtcttgaacgtgcacattcacggggtgtcaccagcgtttctttctctcgggatggaagc
cagatacttagtacatcatttgacaacactgcaagaatccatggcctaaaatctgggaag
ttgttgaaagaatttcgtggccattcttattatgtaaatgatgcaatatttacgagtgat
ggaactcgtgtaattactgcatctagtgatggcacagtcaaggtctgggatttgaagact
actgactgtctacagacatttaaaccacctcctcctttaaagggaactgatgctgctgtg
aattcagttcatctttacccaaaaaatacggatcacatcattgtatgcaataggacatca
tcaatatatgtcatgacacttcaaggacaggttgtgaagagcttttcatctggtaaaaaa
gaaggtggagattttttggcagcttgtgtgtcaccaaaaggggaatggatttactgtgtt
ggcgaagacaggaatctgtactgtttcagtaatcagtctggcaaattagagcatctaatg
aaggtccatgaaaagacagtaattggcttaactcatcatcctcacaggaatcttctagcc
acatatagtgaagactgcacaatgaagttatggaagccttga
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