Prunus mume (Japanese apricot): 103319369
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Entry
103319369 CDS
T03196
Name
(RefSeq) crossover junction endonuclease EME1B-like
KO
K10882
crossover junction endonuclease EME1 [EC:3.1.22.-]
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum03440
Homologous recombination
pmum03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
103319369
03460 Fanconi anemia pathway
103319369
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmum03400
]
103319369
DNA repair and recombination proteins [BR:
pmum03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
103319369
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ERCC4
EME1-MUS81_C
Motif
Other DBs
NCBI-GeneID:
103319369
NCBI-ProteinID:
XP_016647845
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All DBs
Position
LG2:complement(3236128..3246198)
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AA seq
578 aa
AA seq
DB search
MSKPQQPIVLSDEEEEENDQNALSSPPPFQPFHCSNKKRRTELYPYPNLNTQTPVLVLDD
DDDPTRPTRKPPGPTSLRYFEVLDESPCSKAPSSQASVSDSPRKFSGINGLVFLESDNES
ESSSGRERGKDNKSISSGFGVAKGLDWSSRFVESTSSLGHDSLAHMSEDCSVQPVSLQDD
FDINQVLDPDKENRMDQMGNIVKQRRKTKAITEKSIRDEAMGRRKMAKEERIRLMEEKNL
KKQQEKLQRAALKSEAAEMKKIQKEEQKWEKGKFAVKSIVAEIDLKVVELGSVGGNLLTR
FAERGITYRITSNPIEKSIVWTMTVPEHISQSSPERIEIQYVLLVYEAEEFCNLVINDSL
LDHVFSVRSRYPSYTVCYLTNRLMAYINKREQEVYKNLTKDNDWRRPPVEEVLAKLTTNF
FKVHSRQCIDEAELAEHIVGLTCNLSSCQFRKKLTRLDVNANGPLMIKDCVDRNLINKSA
WLKALVAIPKVQPRFAIAIWKKYPTMKSLLSVYMDQNMLVHQKEFLLKDLVTEGLLRDDR
RVGEVCSKRVYRILMAQSGSIKTDDVEDGADLFRHQLA
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagcctcagcagccaatcgtcctctccgacgaagaagaagaagaaaatgaccag
aatgccctctcctcacctcctccattccaaccattccactgctctaataagaaacgccga
accgaactctacccctacccaaacctcaatactcagactccggttctcgtccttgacgac
gacgacgaccccaccagaccgacacggaagccaccgggtcccacctcactccgctacttc
gaggtccttgacgagtctccatgctcaaaagctccttcctcccaagctagcgtttcagat
tccccgcgcaagttctccggcattaatggcttggtatttctggaatctgataatgagtct
gaaagtagttctggaagggaaagggggaaggataacaaatcaatttctagtggttttggt
gtggcgaagggcttagattggagttccagatttgtcgaatccacatcttctcttggacat
gacagtctagcacatatgtctgaggactgttctgtgcaacctgtttctttgcaagatgat
tttgatattaatcaggtacttgatcctgacaaagaaaatagaatggatcagatgggcaac
attgtgaaacagagaagaaaaactaaagctattactgaaaaaagtattagagacgaagca
atgggtagaaggaagatggcgaaagaggaaaggatacgcctaatggaagaaaagaatcta
aagaagcaacaagagaagttgcagagagcagctctgaaatctgaagcagcagagatgaaa
aagattcagaaagaagaacaaaagtgggaaaaaggaaagtttgctgtgaaatccatagtg
gctgagattgaccttaaagtagtggaattggggtcagttggaggaaatctgcttacaagg
tttgctgaaagagggataacataccgtataacatcaaatccaattgaaaaatcaattgtc
tggaccatgactgttccagaacatatttcacagagttctcctgaacgaatagagattcaa
tatgtattgctcgtgtatgaagctgaagaattttgtaaccttgtcatcaatgactctctc
ttggaccatgtttttagtgttcgaagtcgttatccatcctatacagtgtgttatcttaca
aataggttgatggcatatattaataaaagggaacaagaagtgtacaagaacctaacaaag
gataatgattggagacgccctcctgttgaggaggtgctggcaaaattgaccactaatttt
tttaaagtacattccaggcagtgcatagatgaggctgaacttgctgaacacattgttggt
ttgacgtgcaacctctcatcctgccaatttagaaagaagttaacgagactggacgtaaat
gctaatggacctcttatgattaaggactgtgttgaccggaatttaattaataagagcgca
tggttaaaagctttggtagctatcccaaaggtacagccacggtttgctattgctatatgg
aagaagtaccctaccatgaaatctctgttgagtgtttacatggatcaaaatatgttggtt
catcaaaaggaatttctgctgaaggacttggtaactgaaggtttacttcgcgatgacaga
agagtgggtgaggtttgttccaagagagtgtacagaatacttatggcacaaagtggatcc
attaaaactgatgatgttgaggatggtgcggatttgtttaggcatcaactggcttaa
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