Prunus mume (Japanese apricot): 103319455
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Entry
103319455 CDS
T03196
Name
(RefSeq) probable rhamnogalacturonate lyase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
pmum
Prunus mume (Japanese apricot)
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
103319455
Enzymes [BR:
pmum01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
103319455
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GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
Motif
Other DBs
NCBI-GeneID:
103319455
NCBI-ProteinID:
XP_008219218
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Position
LG2:4322867..4330556
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AA seq
695 aa
AA seq
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MSTFHVRSGKGPKGDAFSVSKTWLSVKLCFIVLLIQAVTFPAAAAQNITGLQLHIREQDV
VMDNGILQVTLSKPAGMITGIQYNGVDNLLEILNEDSNRGYWDLVWDAPEIKRKKGEFDR
METTNFTVIVETENQIELSFTRMWDPSLEGKFVPLNIDKRFVMLRNSSGFYTYGIYEHLK
DWPAFNLTNTRVVFKLRKDKFHYMAMSDNRQRYMPLPDDRTAERGQPLAYPEAVLLVNPV
EPEFKGEVDDKYQYSIENKNNRVHGWISTVTDPPMGFWQITPSEEFKSGGPLKQCLTSHV
GPITLAIFHSTHYSGADLILQFGPNEPWKKVFGPVFIHLNSLVNGDDPLKRLWEDAKQQM
EVEVQSWPYDFPASKDFLPLDQRGSVSGRLLVHDRYISDEDLPGNGTLVGLAAPGNVGSW
QFECKGYQFWTKADEKGCFSITGIRPGTYNLFAYVPGLIGDYRYDAEVTISPGCDKDVGT
LVYEPPRSGPTLWEIGIPDRTAAEFFVPDPNPKYINKLYLNHTDRFRQYGLWERYADLYP
HNDMVYTVGVSDYRKDFFFAQVTRKTDNNTYQGSTWQIKFKLDIVDKNNTYKLRIALATA
HVSDLQVRINDLRPSNPHFSTGLIGNDNTIARHGIHGLYRLYNVDVPGVQLVEGNNTIFL
TRTWSTSPFQGIMYDYIRLEGPPSSKGNNLGFSSK
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacctttcatgtcagatcaggaaagggaccaaaaggcgacgctttttccgtctcg
aaaacatggctgtcggtaaagttgtgtttcatcgttctcttaatccaggccgtgactttc
ccagccgctgctgcgcaaaatatcacaggcctgcagttgcatatccgtgaacaagatgtg
gtgatggataatgggattctccaggtgacgttatcaaaaccagccgggatgatcaccgga
attcaatataatggcgtcgacaatttgcttgaaattcttaatgaagattccaatagaggg
tattgggacctggtttgggatgcgccagaaattaaaagaaaaaaaggcgaatttgatagg
atggaaacaaccaattttacagtgattgtggaaactgagaaccagatagagctttcattc
accagaatgtgggatccctctctagaaggaaagtttgtgcctctaaatattgacaaaagg
tttgttatgcttcgcaactcctcaggcttctatacgtacggtatctatgaacacttgaag
gattggcctgctttcaacttgaccaataccagggtcgtgtttaagctcagaaaagacaag
tttcattacatggcaatgtcagataatagacaaagatacatgccacttcctgatgatcgg
acggcagaaagaggccaacccctagcttacccagaggctgtcttgcttgtcaatcctgtg
gagccagagtttaaaggagaagtggatgataagtatcaatattcaattgagaacaagaac
aatcgggtgcatggatggatatccacggtcactgacccacccatggggttctggcagatt
actcctagcgaagagttcaaatctggtgggcctctcaaacagtgccttacttcccatgtt
gggcccatcacccttgctatatttcacagcacccattactcaggagcggatttgatatta
caatttgggccgaatgagccatggaagaaggttttcgggcccgtttttatccatcttaat
tctttggtgaatggagatgacccacttaagcggctatgggaagacgctaaacagcagatg
gaagttgaagttcaaagctggccatatgattttccagcttccaaggactttctgccgttg
gatcaacgaggtagtgtgagcggcagattactagtccatgacaggtatattagtgatgaa
gacttacccggaaatggtaccctggtggggttggcagctccaggaaatgttggatcatgg
caatttgaatgcaagggatatcaattttggactaaagcagacgagaaaggctgcttctcc
ataactggaatccgtccaggcacctataatctttttgcctatgttcctggtttaattggt
gattatcgatatgacgctgaagtaaccatatctccaggttgtgataaagatgtgggtaca
cttgtttatgaacctccaagaagtgggccgactctatgggaaataggcattccagatcga
actgcagcagaattctttgttcctgatcctaacccaaagtacattaacaagctctatctc
aaccacactgacaggtttaggcaatatggattgtgggaaagatatgcagatttatatcct
cacaacgacatggtttacaccgtgggcgttagcgattatagaaaagatttcttctttgct
caggttaccaggaagacagataataacacataccaaggatcaacatggcagattaagttc
aaacttgacattgtggacaagaacaatacctacaaactacgaatagcactagccacagca
catgtttctgacttacaagttcggatcaatgacctccgaccaagcaatcctcatttttca
acgggactgattggaaacgataacaccatcgcaaggcatggaattcatgggctgtatagg
ctgtacaatgtcgacgttcctggtgttcagctggtggaagggaacaataccatttttcta
actcgaacatggagtacaagtcctttccaaggaattatgtatgactatattcgtttagaa
ggtcccccatcttctaagggcaacaatcttggattcagttccaagtaa
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