Prunus mume (Japanese apricot): 103319460
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Entry
103319460 CDS
T03196
Name
(RefSeq) probable rhamnogalacturonate lyase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
pmum
Prunus mume (Japanese apricot)
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
103319460
Enzymes [BR:
pmum01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
103319460
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GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarbopepD_reg_2
CarboxypepD_reg
BsuPI
Motif
Other DBs
NCBI-GeneID:
103319460
NCBI-ProteinID:
XP_008219222
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All DBs
Position
LG2:4411491..4417488
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AA seq
660 aa
AA seq
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MSSQRVQLDIQDNHVVMDNGILQVTLSKPDGIVTRIQYNGIDNLLEVLSDEVDRGYWDLV
WSEAGSVGTTGTFDVIKGTEFKVIVESEEQVEVSFTRKWNPSQKGKLVPLNIDKRFIMLR
NSSGFYSYAIYDHLKEWPPFNLPQTRIVFKLRKEKFQYMAIADNRQRYMPLPDDRLQERS
KVLDVPEAVLLVNPIEPEFKGEVDDKYEYSSENQNLRVHGWICMDPPVGFWQITPSDEFR
SGGPLKQNLTSHVGPYCLAMFLSAHYSGEDLVLKLKPDEPWKKVFGPVFIYLNSLTSNAN
DDPSPLWEDAKHQMMTEVQKWPYDFPASSEFPPSDQRGNVSGRIQVRDRYVSEDCIPGKG
AYVGLAPPGDAGSFQRDCKGYQFWTRADEHGYYSIKNIREGQYNLYAWVPGFIGDYRYDA
AINITSGCDIDMGELVYEPPREGPTLWEIGIPDRSAAEFYVPDPNPNYINKLYVNHPDRF
RQYGLWERYADLYPDQDLIYTIGTSDYAKDWFFAQVTRKKDDDTYEGTTWQIKFQLDNVN
QSGTFKLQISLATANIAELQIRINDPQADTPLFTTGVIGKDNTILRHGIHGLYWLYSIDI
PATLLVEGNNTLFLTQPISNSPLAAFHGLMYDYIRLEGPPSSTSTRRVKPANMAPNTPLD
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgtcatctcaaagggtgcaattggatattcaggacaatcatgtagttatggataatggc
atactccaagttaccttgtcaaaaccagatggaattgttaccagaatacaatacaatggc
atcgacaatttgcttgaagttcttagtgacgaagttgacagagggtattgggaccttgta
tggagtgaagctggaagtgtgggcacaacaggaacgtttgatgtgattaagggtacagaa
ttcaaggttatagtggaaagcgaggaacaagtagaggtctcgttcacaagaaagtggaat
ccctcccaaaagggcaagcttgtccctctaaacatagacaaaaggtttattatgcttcgt
aattcttcaggattctactcctacgccatctatgatcacttaaaagaatggcctcctttc
aaccttccccagaccagaattgtgttcaagctcagaaaagaaaagtttcaatacatggcc
atagcagataacaggcaaagatacatgccccttcctgatgaccgattgcaggagagaagt
aaagtcttagacgtacctgaggcagtccttcttgtcaatccgatagagccagaattcaag
ggagaggtggatgacaaatacgaatactcaagcgagaaccaaaacctgcgggtccacggt
tggatttgtatggacccgcccgtggggttctggcaaataactcccagtgatgagttcaga
tctggtggacccctcaaacagaatctcacctcccatgttggcccctattgtcttgctatg
tttcttagtgctcactattcgggagaggatctggtgctgaagctgaaaccagatgagcca
tggaagaaagtctttggccctgtttttatctatcttaattcccttacgtccaatgcaaat
gatgatccatcaccactctgggaggatgcaaaacaccagatgatgacagaagtgcaaaaa
tggccttacgatttccctgcttccagtgagtttccaccgtcggatcaacggggtaatgtt
agtggtagaatacaggttcgagataggtacgttagtgaagattgcattccgggaaagggt
gcttatgtaggcttggcaccaccaggagatgctggatcctttcaaagagattgcaagggc
taccagttctggactagggcagatgagcatggctattactctataaagaatatacgtgag
ggccaatataatctttatgcatgggttcctggtttcattggagattatcgatatgatgca
gccattaacataacctcaggttgtgatattgacatgggtgagcttgtatatgagcctcca
agagaaggaccaacattgtgggaaattggcatccctgatcgttctgcagctgaattctat
gttcctgatcctaatccaaactatatcaataaactttatgtcaaccatcctgacaggttt
aggcagtatgggttatgggaaagatatgcagatttatatcctgatcaagacttaatttac
actattggcaccagtgactatgctaaagattggttcttcgctcaggttaccaggaagaaa
gatgacgacacatatgaaggcactacatggcagatcaagtttcaactcgacaatgtcaat
cagagtggaaccttcaaacttcaaatctccctcgctacagcgaatatcgcagaattacag
attcggataaatgacccgcaagcagacactcctctgtttacaactggagtgattggaaag
gacaacacaattctaaggcatggaattcatggcctctactggctgtatagcatagacata
ccagccacattgcttgtggaaggaaacaacacactgtttctaacacaaccaatcagcaac
agccctttggccgctttccatggactcatgtatgactatattcgtttagaaggtccacca
tcttctacttccactagacgtgtcaaaccagccaatatggcaccaaacacaccattggat
tag
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