Prunus mume (Japanese apricot): 103319511
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Entry
103319511 CDS
T03196
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 16
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
pmum
Prunus mume (Japanese apricot)
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pmum01002
]
103319511
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pmum04121
]
103319511
Enzymes [BR:
pmum01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
103319511
Peptidases and inhibitors [BR:
pmum01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
103319511
Ubiquitin system [BR:
pmum04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
103319511
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
zf-MYND
Motif
Other DBs
NCBI-GeneID:
103319511
NCBI-ProteinID:
XP_008219286
UniProt:
A0ABM0N461
LinkDB
All DBs
Position
LG2:complement(4977117..4984850)
Genome browser
AA seq
1109 aa
AA seq
DB search
MHVVVDLGFRSLVLVACFLVPVIGFFVVRRKWRLAKARTEEIKRLLILAKEEAARAEFEV
AAGYAAVSVAENKGSYCAVCYCPTTTRCARCKAVRYCSGKCQIIHWRQGHKEECHPPSHQ
SIDREGDAGLNVAKKDLEINTDKIENRQSVERFSEEPALPNPGCSPEVQCITDDDSEDEF
LSERKGTNSTSESSATSFSGFSTSASCTGSSDDASVSESVSSCESDRPDGHPSANDSLDM
LHTSFNVDNIEQSKPLSPKFASLVDSVNGFAKLGKLSQAKPSCNDGENKRRSNCSSDLNK
SSRSEGPVTESCTPSSGFWGRTLDSVGSSSDVQVSDSSVASNSKVPGFGSSLQFSFNLSG
NTAPALHMLGSGSSGTILGDARTDCSELNKSIYGADLSEKISGDAPKVRNSPSRNCKGSN
NEVNGSSSDLHALKSRAVNSTPSSSPSVHKSIRTERVSKVTDALNSSRMLPTSLERSNHA
VNNCGRTSNLSKSREVGCPPSVSDARLASAVESSSLPCVKAGKVDFVEARDAVSSQVTNS
SNDRNGLKTSVFKVFDQFRGSKISKHYPLGVGTEIAGKHIEKELFSYELFVKIYNWNKVE
LRPSGLINCGNSCYANAVLQCLAFTPPLTAYLLQGLHSKVCVNKEWCFMCEFESLVSKAK
EGKSPLSPMAILSQLRNIGSQLGNGREEDAHEFLRYAIDMMQSVCLMEAGINASRSLKEE
TTLIGLTFGGYLRSKIECSKCQGKSERQERMMDLTVEIEGDIGTLEEALRRFTSTETLDG
ENKYQCSRCKSYEKAKKKLTILEAPNILTIALKRFQSGKFGKINKPIRFPEILDLAPYMS
GTSDKSPIYRLYGVVVHLDIMNAAFSGHYVCYVKNSHNKWFKIDDSTVTAVELENVLTKG
AYMLLYSRCLPRAPRLIRNRIISPDPRHRAIPSWISGKTTNLKPKSVSPHSSVDPFLPSS
NPPEDTTSSQLKRILEEDSSSDNSSLISNNSDEGSCSTDSTRDSSSADDLSDYIFGNSGR
GWSSPWRNFSDSDTSSSSSSSPSSTKHSPLSDSNRYASDGAMTLPFLHSDTSKHCRKLAS
SSSSRNRETDSERLGPDSLRDVKFKKSSR
NT seq
3330 nt
NT seq
+upstream
nt +downstream
nt
atgcatgtggttgtggatctagggtttcggagcctcgtgctggtggcttgttttttggtg
ccggtgatcggcttcttcgtggtccgaaggaaatggcgcctcgcgaaggccagaacggag
gagatcaagaggcttttgatcttggccaaggaggaagctgctagagctgagtttgaggtc
gcggctgggtacgccgccgtttcggtagctgagaataaaggttcttattgcgctgtttgt
tactgccccaccaccacgcgctgcgcccgctgcaaggcggttcggtactgttctgggaag
tgtcaaattattcactggcgacaaggtcacaaggaagaatgccatcctcctagtcatcaa
agtattgacagggaaggtgatgctggcctgaacgtggccaagaaagaccttgaaattaat
actgacaagattgaaaacaggcagtcagttgaaagattctccgaggaacctgcattgcct
aatcccggttgctctccagaagttcaatgtataacagatgatgatagtgaagatgaattt
ctttccgagaggaaaggaacaaattctacttcagaatcatcagctacctctttttctgga
ttttctacttctgccagctgtactggatcttcggatgatgcttctgtcagtgagagtgtt
agttcatgtgaatctgacagaccagatgggcatccatctgcaaatgattcccttgacatg
ctacacacttcctttaatgttgacaacattgaacaatctaagccattatctccaaaattt
gctagcttggttgattctgttaatggttttgctaaattaggtaagttaagtcaggctaaa
cctagttgcaatgatggagagaacaagcggagatcaaattgttcttcagatttgaacaaa
agtagcaggagtgagggtccagttaccgagtcttgtacaccatcttctggtttctggggg
agaactctcgattctgtagggtccagtagtgatgtccaggtgtccgattccagtgtagcc
agtaatagcaaggtacctggttttgggtcttccttacagttttctttcaacttgtctgga
aatactgctcctgccttgcatatgcttggctctgggtcaagtggcactatactaggggat
gctcgtacagattgttcagagctcaacaagtcaatttatggagctgatttatcagagaag
atcagtggagatgctcctaaggtcaggaactccccatcccggaactgtaaagggtcgaat
aatgaggttaatggatctagcagtgatttacatgccttgaagtccagagcagttaattct
acaccatcctcctcgccttctgttcataaatctattcgcactgaaagagtttcaaaagtt
acagatgctttgaattctagtagaatgctacccacaagcttggaacggtccaaccatgct
gttaataactgtggcagaacttcaaatctttcaaagtctagggaagttggatgtccaccc
agtgtttctgatgctcgtcttgcatctgctgttgaaagttcttcacttccatgtgtaaaa
gctggaaaagttgattttgttgaggctagggatgctgtttcatctcaagttacaaattct
tcaaatgataggaatggcttgaaaacgtctgtgtttaaagtttttgatcagtttagagga
tctaaaatatcaaagcactatcctttgggagttgggactgagattgcaggaaaacatatt
gagaaggaacttttttcatatgaattatttgtcaagatttacaattggaacaaggtggaa
ttgcgcccttctggccttataaattgtggtaacagctgttatgccaatgcggtgctccag
tgcttggcattcactccacctctgactgcttatttgcttcaaggactccattctaaagtt
tgtgtaaataaggaatggtgtttcatgtgtgagtttgaaagtctagtttcgaaggcaaag
gaaggaaaatcccctctgtctcctatggcaatactttcccagttaagaaatattggaagt
caacttggtaatgggagagaagaagatgcccatgaatttctaaggtatgctattgatatg
atgcaatctgtttgtcttatggaagcggggattaatgcatcgcgctctttgaaagaagaa
acaactctaattggccttacatttggaggctaccttcgatcaaagatagaatgctcaaag
tgccaaggaaagtctgagcggcaggaaagaatgatggatcttactgttgagattgagggt
gatataggaaccttggaagaggctcttcgacggttcaccagtactgagaccttggatggg
gagaacaaataccaatgtagcagatgcaaatcgtatgagaaggccaaaaagaagttgaca
atactggaagctcccaatatccttaccattgcactgaagcgttttcagtcgggaaaattt
gggaagatcaataagcctattcggtttcctgagatcctggacttggcaccttatatgagt
ggtacaagtgataaatctccaatatatagactctacggggtggttgttcacttggatatc
atgaatgccgcattttctggtcactatgtgtgctacgttaagaactcccacaacaagtgg
tttaagatcgatgacagcacggtaacagctgttgaacttgaaaacgtcttgacgaaaggg
gcatacatgcttctttattcgaggtgtttgccaagggccccaagattgataagaaacaga
ataatatctcctgatcccagacatagagccattccttcctggattagtggaaagactacc
aatttgaaaccaaaatccgtctcaccgcattctagcgttgacccattcttacccagttca
aatcctccagaggatacaacgagttctcagctgaaaaggattttagaagaggactcatca
agtgacaattcttcccttatcagcaacaactctgacgaaggttcttgtagtactgatagc
actcgtgattcttctagcgccgatgacttgtccgattatatatttggtaattcaggacgt
ggttggagtagcccttggaggaatttttcggattctgacacttcttcctcatcctcttcc
tcaccctcaagtacgaagcattcaccactctctgattcaaaccggtacgcttcagatggt
gcaatgactcttccttttttgcattctgacaccagtaaacattgtagaaagttagcaagt
agtagtagtagtagaaatagggaaactgactcggagagattaggacccgactctttaagg
gatgtaaaatttaaaaaatcaagtagataa
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