Prunus mume (Japanese apricot): 103319512
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Entry
103319512 CDS
T03196
Name
(RefSeq) eukaryotic translation initiation factor 3 subunit C-like
KO
K03252
translation initiation factor 3 subunit C
Organism
pmum
Prunus mume (Japanese apricot)
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
pmum03012
]
103319512
Translation factors [BR:
pmum03012
]
Eukaryotic type
Initiation factors
eIF-3
103319512
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eIF-3c_N
PCI
EIF3CL_C
Regnase_1_C
SLATT_5
Motif
Other DBs
NCBI-GeneID:
103319512
NCBI-ProteinID:
XP_008219287
UniProt:
A0ABM0N462
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All DBs
Position
LG2:4989461..4994567
Genome browser
AA seq
935 aa
AA seq
DB search
MSSRFWTQPGSSSEEEESDYDEEVENTGGEATTEPVGNRYLEVNQSDSDDPDDERRVVRS
AKDKRFDELSATVHQMKNAMNINDWVSLQESFDKINKQLEKVMRITEAVKVPTLYIKALV
LLEDFLAQALANKDAKKKMSSSNAKALNSMKQKLKKNNKQYEELINKYRENPEQSDEDKE
AEEDSEDDGSVSEIEDPTDIVMSNSDDDGEEEEDEKDDQTDEGWEKKMSKKDKLMDRQFM
KDPSEITWDTVNKKFKEVVAARGRKGTGRFEQVEQLTFLTKVAKTPAQKLEIFFSVVSAQ
FDVNPGLNGHMPINVWKKCVQNMQVILDILVKYPNITVDDMVEPDENESQKGPDYDGTIR
VWGNLVAFLERIDTEFFKSLQCIDPHTREYIERLRDEPMFLCLAQNVQDYLERVGNYKAA
AKVALRRVELIYYKPQEVYDAMRKLSEQTGESDNGEEPKAAEESRGPSPFIVIPELVPRK
PTFSESSRTMMDILVSLIYKYGDERTKVRAMLCDIYHHALRNEFCTARDLLLMSHLQDVI
QQMDISTQILYNRAMAQLGLCAFRSGLITEGHSCLSELYSGGRVKELLAQGVSQSRYHEK
TPEQERLERRRQMPYHMHINPELLEAVHLICAMLLEVPNMAANIHDAKRRLISKTFRRLL
EVSEKQTFTGPPENVRDHVMAASRALGKGDFQKAFDVINSLDVWKLLPNRENVLEMLKAK
IKEEALRTYLFTYSSSYKTLSLEQLTKLFDLSEAQIHSIVSKMMVNEELFASWDQPTRCI
VFHGIEQTRLQALAFQLTEKLAILAESNERATEARIGGGGLDLPQRRRDNQDYATGTAGG
GGRWQDNNLSFNQGRQGGGSGRAGYNTGGRSFNQNAGGGYSRDRAGQYRGSGQNSRYQDA
AYAGSGRTGYQTGSASRGSQDTSTRMVSLHRGLRA
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcccgcttttggacccagcctggaagctcctcagaggaggaggagagtgactat
gatgaggaggttgaaaatacaggtggtgaggctaccactgaaccagttggaaaccgatac
cttgaggttaatcaaagtgacagcgacgaccctgatgatgaaaggcgtgtcgttagatca
gcgaaagacaaacgctttgatgaattgtcggcaactgttcatcaaatgaagaatgccatg
aatatcaatgactgggttagcttgcaagagagctttgacaagataaataagcaacttgag
aaggtcatgcgtattacagaggctgttaaagtacccactctatacataaaagcgcttgta
ttgttggaagactttttggctcaggctttggcaaacaaggatgctaagaagaagatgagt
agtagcaacgccaaggccttgaactcaatgaagcagaaattgaagaagaacaataagcag
tatgaggaattgattaataagtatagggagaatcctgagcagagtgacgaggataaggaa
gcagaagaggattcagaagacgacggatccgtttctgaaattgaggatcctactgatatt
gtaatgtcaaatagtgatgatgatggggaagaagaagaagatgaaaaggatgaccaaact
gatgaaggctgggagaagaagatgagtaagaaagacaagctcatggataggcaattcatg
aaggacccaagcgagatcacatgggatacagttaacaagaaatttaaagaggttgtggct
gctcggggaaggaagggaactgggaggtttgagcaggttgagcagcttaccttcttgaca
aaggttgctaagacccctgcacagaagctggagatattttttagtgttgtttctgctcag
tttgatgtgaatcctggtctcaatgggcacatgccaataaatgtctggaagaagtgcgtg
cagaatatgcaagttatacttgatattcttgtgaagtatcctaacattacggtggatgat
atggtggaacctgatgagaatgaatcccagaaaggaccagattatgatgggacaattagg
gtctggggaaacttggtggccttcttagaaaggatagatactgagtttttcaagagcttg
cagtgcattgatccccatactcgtgagtacattgaaagacttagggatgagcctatgttt
ttgtgtctagctcaaaatgttcaagattatttagaacgagttggtaattacaaagctgct
gccaaggtagccttaaggcgggtcgaactcatttattataagccacaggaagtttatgat
gccatgagaaaattgtccgagcagacgggagagagcgataatggtgaagagcctaaagcg
gctgaggaaagtcgcggtccatctccatttattgtaattcccgagctggttcctcgaaaa
cctaccttttcagagagtagcaggacaatgatggatattttggtttccctcatatacaag
tatggcgatgagaggactaaagttcgtgcaatgctttgtgatatttaccaccatgctctg
cggaatgagttttgcactgcccgtgacttgctgctaatgagtcacctgcaagatgttatt
cagcagatggacatttcgactcagatactttataatagggccatggcacaacttggtctg
tgtgcatttcgtagtggattaattactgaagggcatagttgcctatctgaactatattca
ggcggaagagtaaaagagttgcttgcacaaggtgtttcacaaagtagatatcatgagaaa
actccagaacaggaaaggctggagaggagacgacaaatgccttaccatatgcatataaac
cctgagctcctggaggcagtacatttgatatgtgccatgctgctggaagtgcctaacatg
gcagctaacatccatgatgcaaagcgcagactgatcagtaagacattcaggaggttgctt
gaggtgagtgagaagcaaacattcacaggccccccagaaaatgtaagggaccatgtgatg
gcagcttccagggcacttggcaagggtgacttccaaaaggcctttgatgtcatcaattct
cttgatgtttggaagctcctcccgaaccgtgagaatgttcttgagatgctcaaggctaag
atcaaggaagaagctctgaggacctaccttttcacctactcctcatcctataagactctg
agcttggaacaactcaccaagttgtttgacctttcagaggcccagattcatagcattgtt
agcaagatgatggtcaatgaagagctctttgcaagttgggaccagccaacacgttgcatc
gttttccatggcattgagcagactaggttgcaggctctagctttccagttgactgagaag
ctggcaatccttgcagaaagtaatgaaagggcaacagaagcaaggataggtggtggtggg
ttagatctacctcaaaggcgtagagacaaccaggactatgctactggaacagctggtggt
ggtggtagatggcaggacaacaacttgtccttcaatcaaggaaggcaaggtggtggcagt
gggcgtgccggatacaacactggaggcagatcattcaaccaaaatgctggtggtgggtat
tctagggaccgagcaggtcagtaccgaggctcagggcaaaactctcgttatcaagatgct
gcatatgccggatcagggaggactggctatcagactggttcagcctcaaggggatctcag
gatacttcaactcgcatggtcagtctacatagggggcttcgtgcctaa
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