Prunus mume (Japanese apricot): 103319584
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Entry
103319584 CDS
T03196
Name
(RefSeq) RING-H2 finger protein ATL34-like
KO
K10664
E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:
2.3.2.27
]
Organism
pmum
Prunus mume (Japanese apricot)
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pmum04121
]
103319584
Enzymes [BR:
pmum01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
103319584
Ubiquitin system [BR:
pmum04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
103319584
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-rbx1
zf-C3HC4
zf-RING_5
zf-ANAPC11
zf-RING_UBOX
zf-RING_16
zf-C3HC4_3
Arc
zf-Nse
Prok-RING_1
DUF1272
SLX1_C
Zn_ribbon_IFT122_C
RINGv
Prok-RING_4
zinc_ribbon_16
PHD_NSD
zf_RING_Vps8
Tmpp129
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
103319584
NCBI-ProteinID:
XP_008219359
LinkDB
All DBs
Position
LG2:5381525..5383190
Genome browser
AA seq
415 aa
AA seq
DB search
MSFNHAALLAWTLSFLLFSQQITAQYPPPPPPSNNSGGPRFDIKMAVVMVVLVVVFFILG
FLSVYTRQCAQTRLQGHVDLALRNGMARGLDPAVIETFPAFLYSDVKGLQLGKDSLECAV
CLNEFQDDETLRLIPKCDHVFHPDCIDTWLLSHSTCPVCRAYLVPKPGEEPYTWVDPTYP
DIESGQPDAGPCTVDEPPPPHMPPRQVSVRVVEDQIKEEESETPVVINLVNVSEGTNQRG
PPRSRSTGFRPLRSGSTGRRFTGILFPRSHSTGHSLVRPGENVEKFTLRLPDEVRAQLMN
SALIRSRSSNVAFPRAGSSRKGIRNDSVRGKSPNLYERFDPSSGSNRASRSSRWGFSMMP
PFVSRNGSVRNQIGDNDVATQSTVAPSESKKSQLAHIDGDDDERSTDALRRKYQV
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgagtttcaaccatgccgccttgttggcgtggacgctcagcttcctcctgttctcgcag
cagatcacagcccaatacccaccgcctccgccgccatccaacaactcaggcgggccgaga
ttcgacatcaagatggccgtggtgatggtggtcctggtcgtcgtcttcttcatcctcggc
ttcttgtccgtctacacccgccagtgcgcccagacccgcctccagggtcatgtggacctt
gcgctccgcaacggcatggcgcgtgggctcgaccccgccgtcatcgagaccttcccggct
ttcctctactccgacgtcaaggggctccagctcggcaaggactcgctcgaatgcgccgtg
tgcttaaacgagtttcaagatgacgaaacgctgcgtttgatccccaaatgcgatcacgtg
ttccacccggattgtatcgacacgtggctgctctctcactccacttgcccagtttgccgg
gcctacctggttcccaagccgggcgaagagccctacacttgggttgacccgacttacccc
gatatcgaatcaggacaacctgatgcaggcccgtgtactgtggatgaaccgccaccaccg
catatgccaccccgccaggtgtcagttcgggtggttgaagatcaaatcaaagaggaagaa
tctgaaacgccagtggttattaatttggtgaatgtgagtgaaggaaccaatcaaagaggt
ccacctaggtcgaggtcaacaggttttagaccgctgaggtcaggatcaactgggaggcga
ttcactggaatattatttccaaggtcacactcgaccggtcactcgttggttcgacccggc
gagaacgtcgagaagtttacactgcgattaccagacgaggtacgagctcagctcatgaac
tcggccttgattcgtagcaggagtagcaacgtggcattcccaagggctgggagttcaagg
aaaggtattaggaatgacagcgtgcgtggaaagagccccaatttgtatgagcggttcgac
ccaagctcagggtcaaaccgggcgagccggtcaagtcggtggggtttctcaatgatgcca
ccttttgtttctcggaacggttctgttaggaaccaaattggagataatgacgtggcaacc
cagtcgacagttgctccatcggaatcgaagaaatcacagttggctcatattgacggtgat
gatgatgaacggtcaactgatgccttgcggagaaaatatcaggtttaa
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