Prunus mume (Japanese apricot): 103319769
Help
Entry
103319769 CDS
T03196
Name
(RefSeq) DNA topoisomerase 2-binding protein 1
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
103319769
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmum03032
]
103319769
03400 DNA repair and recombination proteins [BR:
pmum03400
]
103319769
DNA replication proteins [BR:
pmum03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
103319769
DNA repair and recombination proteins [BR:
pmum03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
103319769
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PTCB-BRCT
BRCT
BRCT_2
LIG3_BRCT
ECT2_BRCT0
TopBP1_BRCT0
Motif
Other DBs
NCBI-GeneID:
103319769
NCBI-ProteinID:
XP_016647302
LinkDB
All DBs
Position
LG2:6771217..6778578
Genome browser
AA seq
983 aa
AA seq
DB search
MLKTTTFKGANVFMSRNLVPPEIFDALHDALKLNGANVFLCCDPSRTGPDDYHVIASSDH
EKFEDLRAKGCNLLGPQCVFSCANQHRALPKQGFTCCLAMDGFKVLASGFEGDEKVKIEK
LVTAMGGVLHAKASLDVNFVIVKNVLAGKYKWALNTLKKPIVTINWLSQCWNEHRNVPQD
SFRVLPFSGLMISVTRIPADERKEIEKLITENGGKYSAELTKKCTHLISDISEGDKYKVA
QRWGHIRIVTRKWFDQSISRRACLNEDSYPVQGGSISSNKSVRGCFTLQNSQRSSSGNLQ
SVPPSVVADSNLTAAPYSGTMDSDLEATVSQNMTTMFSHAPHVVKNEDSKAPPLESKSEA
YLDGCVADDSQSEDNDLYLSECRISLVGFKASEMRRLVNMIRRGGGSRYMSFNDKLTHIV
VGTPSEIQKKEVRGFAALGVIHVVRTTWLEDCDREKKEIPVLPKHIAYDLVLPEGALIGM
TSTIQGTISTTHLSIPSDQLHGNTSAAPGMGSLEKKREKKPEINMKGDKSMEAAVGPSKW
SKLPVINGKSKVQLNNTIDGRLTMQYDSSVQNGKESSVFKGRLFCFSNSFPEDRRGDIIQ
WVNQGGGDVVDGYLKQKVHFTIECHGVITSSVDVAQTTYVSSHWIRSCLEDGCLLDVSSH
ILYAPLPCRIPLPGFENFRFCVSQYEEKDRLLLRNLCFVLGAKFGEKLTKKVTHLLCKFT
NGPKYQAACIKGIHPITAEWVYECVKKNKVVALDQFYPKKVTAEDREAGLCTMSQYPTQA
VQMISAGNSSECPSQSQDLRTSSGENIGSRNDSLREEASEPSFCYKKARVSEDDGEKGLL
SSGVHLRIPACTAGDRKVKSSGEVSQVVPDVASAIEDLLEQTSKIHDQKSPGRSLCDSSI
FSPDCSALRQDHSDSHSVIGLSRHWLNRAGNKDDIHDPSGEQKAGFYDGFSETQTESQVV
GYEEDLSGRQMLIDRVRTRSSLA
NT seq
2952 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagacgacgacgtttaagggagccaatgtcttcatgtcgcggaacctggtcccg
cccgagatcttcgacgcgcttcacgatgctctcaagctcaatggagcgaatgtcttcctc
tgttgcgacccctcgcgaaccgggccggacgactaccacgtcatcgcttcctccgatcac
gaaaagtttgaggatcttagagccaagggctgtaatttgctcggccctcaatgcgtgttt
tcttgtgcaaaccagcacagggctctgcctaaacaagggtttacttgttgccttgcaatg
gatggtttcaaagtacttgcctctggttttgagggagacgaaaaggttaagatagagaag
ttagtaacagcaatggggggagttttgcatgctaaagcatctttggatgttaactttgtt
attgtgaaaaatgtcttggctggaaaatacaagtgggccttgaatacattaaagaagccg
attgtcactattaattggttatctcagtgctggaatgagcatcgtaatgttcctcaagac
tcctttagggttcttcctttttctggtttgatgatctctgtaaccagaattccagcagat
gagcgaaaggagattgaaaagcttatcacagaaaatggtggaaagtattctgctgaactt
acaaagaagtgcacacatttaatttctgatatatcagaaggtgacaaatacaaggttgca
caaagatggggccacattcgtattgtaactcggaaatggtttgatcaatctatttctaga
agagcttgtcttaatgaggactcctatcctgttcaaggtggttctatatcttcaaataaa
agtgtaaggggttgctttactttgcagaatagccaaaggagcagtagtgggaacttgcaa
tctgtgccaccatcggtggttgcagattcgaatttgacagctgctccttattctgggacc
atggattctgatttagaagctactgtctcacaaaacatgaccactatgttttctcatgct
cctcatgttgtgaaaaatgaggatagtaaagcacctcccttggagtccaaaagtgaagct
taccttgatggttgcgttgctgatgattctcagtctgaagacaatgacctgtacttgtca
gaatgtagaatatctcttgttggctttaaggcttctgaaatgcgtaggttggttaatatg
attcgcagaggtgggggttcccgatacatgtcattcaatgacaagttaacacacatagta
gttggaactccttcagaaatccaaaagaaagaagtgaggggttttgctgctttaggcgta
attcatgttgttagaactacctggcttgaagactgtgatcgtgagaaaaaggagatccct
gttctcccaaagcacattgcctatgatctagttctgcctgaaggagcactgataggtatg
actagcacgattcaaggtacaatctctaccactcatctaagcataccttctgatcagtta
catgggaatacgagtgctgcacctggaatgggatcgttggagaaaaagagagaaaagaaa
ccagaaattaacatgaaaggtgacaaatccatggaagcagctgttggaccatccaaatgg
agtaaactacctgtcataaatggcaaaagtaaggttcagttaaacaatacaattgacggt
cgactgacgatgcaatatgattcaagtgttcaaaatggcaaggaatcatctgtctttaag
gggagattattttgcttttcaaattcctttcctgaagataggagaggtgatatcattcaa
tgggtaaatcaaggaggaggagatgtagttgatggttatttaaaacagaaagtgcacttc
actattgagtgtcatggtgtgataactagttctgtggatgttgctcaaactacatacgta
tcaagtcactggatccggtcttgtttggaggacgggtgcttgctggatgttagtagtcac
attttatatgctccacttccctgccggattcctttgcctggatttgaaaattttcggttt
tgtgtttcgcaatatgaagagaaagacagactgttactaagaaatttgtgttttgtactt
ggagctaagtttggggaaaagctgacaaagaaggttacacatttactatgcaagtttacc
aatggaccaaagtatcaggctgcttgtataaaggggatacacccaattacagctgagtgg
gtatatgagtgtgtgaagaagaataaagtcgttgctcttgaccaattttatccaaaaaaa
gtcactgctgaagatcgagaggcagggctgtgtactatgagtcagtatcctacacaagct
gttcaaatgatatctgcaggcaattcatctgagtgtccaagtcaatcacaagacctgaga
acctcatcaggagaaaacattggcagtagaaatgacagcctcagggaagaggccagcgaa
ccaagtttttgctataagaaggcaagggtttcagaagatgatggcgaaaagggtctactt
tcatctggggtacatttacgtattcctgcctgtaccgctggagacagaaaagtaaaaagt
tctggtgaagtttctcaagtggttcctgatgtagcttctgctattgaggacttgttggag
cagacaagtaagattcatgatcagaagtcaccagggaggagtttgtgtgatagcagtatt
ttttcgccggattgttcagctcttcgtcaagaccactctgattctcactccgtcattgga
ttatcgagacactggttaaacagggctgggaataaagatgacatccacgatccttctgga
gaacaaaaagctggcttttatgatggctttagtgaaacacagaccgagtctcaggttgta
ggctatgaggaagatttgtcgggccggcaaatgcttatagacagagttcgaacccgtagt
agcctggcttga
DBGET
integrated database retrieval system
