Prunus mume (Japanese apricot): 103319832
Help
Entry
103319832 CDS
T03196
Name
(RefSeq) long chain acyl-CoA synthetase 9, chloroplastic
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum00061
Fatty acid biosynthesis
pmum00071
Fatty acid degradation
pmum01100
Metabolic pathways
pmum01212
Fatty acid metabolism
pmum04146
Peroxisome
Module
pmum_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
103319832
00071 Fatty acid degradation
103319832
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
103319832
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pmum01004
]
103319832
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pmum04147
]
103319832
Enzymes [BR:
pmum01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
103319832
Lipid biosynthesis proteins [BR:
pmum01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
103319832
Exosome [BR:
pmum04147
]
Exosomal proteins
Exosomal proteins of breast milk
103319832
Exosomal proteins of breast cancer cells
103319832
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
Motif
Other DBs
NCBI-GeneID:
103319832
NCBI-ProteinID:
XP_008219646
LinkDB
All DBs
Position
LG2:complement(7267186..7274082)
Genome browser
AA seq
695 aa
AA seq
DB search
MGLYLVGALVPLVLTLILQKSKKATKRGLPVNVGGEPGFTIRNRRFTSPVETLWEGISTL
AELFEQSSKRFQDRRFLGTRALIAREVEISKDGRSFEKLHLGDYEWLTYGKAFEVVCNFA
SGLAQLGHKKEERVAIFADTREEWFIALQGCFRRNVTVVTIYASLGEEALCHSLNETEVT
TVICGHKELKKLLDISGQLDTVKRIICMDDEIPSSASSVESRWRITSFDVVERLGRESPV
EPDLPLPADVAVIMYTSGSTGLPKGVMMTHANVLAVASAVMTIVPGLGSKDVYLAYLPLA
HILELAAENVMVAVGSAIGYGSPLTLIDTSSKIKKGTKGDATVLAPTVLTAVPAILDRVR
DGVLNKVNAKGGLSQRLFHLAYARRLSAVNGSWFGAWGLEKFLWNFLVFRKVRAVLGGSI
RFILSGGAPLSGDTQRFINICIGSPIGQGYGLTETCAGGTFSEFDDTSVARVGAPLPCSF
IKLIDWPEGGYLKTDSPMPRGEIVIGGPNVTLGYFKNEEKTRESYKVDEKGMRWFYTGDI
GQFHADGCLEIIDRKKDIVKLQHGEYVSLGKVEAALSVCPYVDNIMLHADPFHSYCVAIV
VASRITVEDWAAKQGIAFSDFSDLCVKEETIKEVQASLIKEAKKARLEKFEIPAKIKLLS
EPWTPESGLVTAALKLKRDVIKKAFSEDLSKLYAS
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgggtctctaccttgttggtgcccttgttcctcttgtactaactcttatacttcagaaa
tctaagaaagcaacaaaacggggtttgcctgttaatgttggtggggaacctgggtttaca
atccgaaaccgtcggtttacttccccagtggaaacattatgggaaggtatttcaactctt
gctgaactttttgagcagtcatcaaagcggttccaagatagacgctttcttggaacccgg
gcattgattgcaagggaggttgaaatatcaaaggatggaagatcctttgagaagcttcat
ttgggagactatgaatggctaacctacgggaaagcatttgaagttgtgtgcaactttgct
tctggtttagcccaacttgggcataaaaaggaagaacgagtagcaatctttgctgacaca
agagaagagtggtttattgcattgcagggttgttttaggcgcaatgtcactgttgttacc
atatatgcgtctcttggggaggaggctctatgtcactcattaaatgagacagaagttact
actgtgatatgtgggcacaaagaactgaagaaactgctagatataagtggacaactagac
acagtgaagcgcatcatatgtatggatgatgagatcccatctagtgcctcatctgttgaa
agtagatggagaatcacttcattcgatgttgttgagagacttgggcgagaaagccctgtt
gaacctgatctacctcttcctgcagatgttgcggtcattatgtatacaagtggaagtact
gggttacccaagggtgtaatgatgacacatgctaatgtgctagctgtagcttctgctgtc
atgactattgttcctggccttggaagcaaggatgtttatctggcataccttccccttgct
catatccttgaattagcagcggagaatgtcatggttgctgtgggaagtgccatagggtat
ggatctccattgactcttattgatacttcaagtaaaataaagaagggaacaaagggggat
gcaactgtgcttgcgccaactgtattgacagcagtccctgcaattcttgatcgtgttcga
gacggagtgctgaataaggtaaatgcaaagggtggtctatcccagagattgtttcacttg
gcatatgctcgtaggttgtctgctgtgaatggtagttggtttggggcctggggcctggaa
aagtttctgtggaactttcttgtgtttagaaaggtccgtgcagttttaggaggtagcatc
cgttttatcctttctggtggtgctcctctttcgggtgatactcaaagattcatcaacatt
tgcattggttctccaattggtcaagggtatggtctaactgaaacttgtgctggcgggaca
ttctcagagtttgatgatacatctgttgctcgtgttggagctccgcttccatgctcattt
ataaagttaattgattggcccgaaggaggatatctaaaaactgattccccaatgccgcgt
ggagagatagtcatcggtggtccaaatgttacacttggttatttcaaaaatgaagaaaaa
acaagagagtcatacaaggttgatgagaaaggaatgagatggttctatacaggtgacatt
gggcaatttcacgctgatggttgtcttgagataattgaccgtaagaaagatatagttaaa
cttcagcatggagagtatgtctccttaggaaaggttgaggctgctctttcagtgtgcccc
tatgttgacaatatcatgttgcatgctgatccttttcatagttactgtgtggctattgtg
gtggcttctcgaatcactgtggaagattgggctgcaaagcaaggaattgcttttagtgat
ttttcagacttgtgtgtgaaagaagaaaccataaaagaagtgcaagcatcgcttataaag
gaagcaaagaaggcacgtttggagaagtttgagatccctgccaaaatcaaattgctttct
gaaccgtggactccagaatctggcctggtcactgcagctctcaagctcaagagagatgtc
attaagaaggctttctctgaagacctctccaagttatatgcttcatga
DBGET
integrated database retrieval system
