Prunus mume (Japanese apricot): 103319866
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Entry
103319866 CDS
T03196
Name
(RefSeq) probable polygalacturonase At3g15720
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum00040
Pentose and glucuronate interconversions
pmum01100
Metabolic pathways
Module
pmum_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
103319866
Enzymes [BR:
pmum01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
103319866
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
103319866
NCBI-ProteinID:
XP_016646957
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Position
LG2:complement(6045275..6047672)
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AA seq
396 aa
AA seq
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MQDILTSFFIFCIASSQLLGIVYSKTTFDVVKFGAVGDGQTDDTEAFVKAWTALCGAAAA
GDDVPALIIPGRKTFLLQPLEFEGPCKSKSVHVQVLGNLVAPKTPDAWKVCPPHSWLVFR
KVGNLIIDGSGKIDGQGSTWWEALHFLRCDHLRLSGLTHINSPRSHIGISTSNDVDISHL
TIIAPDESPNTDGINVTNSTYVNIHDSKIGTGDDCIAISSGSSNVRIAKIACGPGHGISV
GSLGADGAYAAVENIYVRDCSFNGTQNAARIKTWPGGSGYARNITFENITLTATKNPIII
DQQYCNGAHNCPKKSKAVLVSNVRFTGFRGTCVNEEAIKLDCNQIWGCQNIELVKINITS
TVPSKKVYASCNNAKGNSGSTVPTVSCLKYPTRPFI
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgcaggacatacttactagctttttcatattttgcattgcttcatctcagttgcttggt
attgtgtacagcaaaacaacatttgatgttgtcaaatttggtgctgttggagatggccaa
actgatgataccgaagcttttgtaaaagcatggacagccttatgtggagcagctgcagct
ggtgatgacgtaccagcacttatcataccagggagaaaaacattcttattgcagcccttg
gaatttgaaggtccctgcaaatcaaagagtgttcatgttcaggtcttgggtaatttggtg
gcacccaaaacacccgatgcatggaaagtgtgtccaccacatagttggcttgtatttaga
aaagtgggcaatcttataatcgacggttcaggaaaaatcgacggccagggttcaacttgg
tgggaggctctacacttcctccgatgtgatcatcttcgattgagtggacttacccatata
aacagcccaagatctcatattggtataagcacaagcaatgacgtggatatctcccatctg
actataattgcacctgatgaaagtccaaacactgatggaattaacgtcacaaactcaacc
tatgtcaatattcatgactctaaaattggaactggtgatgactgcattgcaatcagttct
ggttcttccaatgttaggatagccaagattgcgtgcggaccaggtcatggaattagtgtg
gggagcttaggagcagatggggcttatgctgcagtggaaaatatatacgtgagagattgt
agttttaatggaactcaaaatgcagcaagaatcaagacatggccgggtggatccggatat
gccaggaatataaccttcgagaacatcacacttaccgcaactaaaaaccccatcattatt
gaccaacaatactgtaacggtgctcacaattgcccaaagaagagcaaagctgtgctggtg
agcaatgtgagattcactggttttagaggaacttgtgttaatgaggaggccatcaaatta
gactgcaaccaaatttggggttgtcaaaacattgaactggtgaaaattaatatcacctca
acggttccaagtaagaaggtttatgcaagttgcaacaatgccaaaggaaattccggctct
actgtgcccactgtatcttgcctcaagtatcccactcgtccattcatctaa
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