Prunus mume (Japanese apricot): 103320111
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Entry
103320111 CDS
T03196
Name
(RefSeq) LOW QUALITY PROTEIN: probable cyclic nucleotide-gated ion channel 14
KO
K05391
cyclic nucleotide gated channel, plant
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
103320111
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pmum04040
]
103320111
Ion channels [BR:
pmum04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
103320111
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GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
103320111
NCBI-ProteinID:
XP_008219956
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Position
LG2:8976855..8980332
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AA seq
731 aa
AA seq
DB search
MELKKDKLVRFYDNEKQDVQFSWEKSDTQKHSKEHKVSAAAAPLLIPEGSTAAVVRAKPH
RFGSFKVFPESHEPYKKKIIDPGSDIFLQWNRIFLFSCLVALFVDPLFFYLPSVLNDGSS
SCVATDLNLGIVVTCFRTLADMFYLLHMFIKLRTAYVSPSSRVFGRGELVMDPNKIARRY
LRTDFFIDLIAALPLPQIVIWFIIPAVRSSHSTNNALVLIVLLQYVPRLYLIFPLSSQII
KATGVVTKTAWAGAAYNLILYMLASHVLGASWYLLSIERYMTCWKSECRKEFSPMKCFLG
YLDCGNLNNDDRRRWMNSTQVFSNCNPENTIDFNYGIFENAMTKNVVSTEFLQKYFYCLW
WGLQNLSSYGQTLTTSTFIGETSFAILIAILGLVLFAHLIGNMQTYLQSITVRLEEWRLK
RRDTEEWMKHRQLPRDLQERVRRFVQYKWVATRGVDEESILHALPTDLRRDIQRHLCLDL
VRRVPFFSQMDGQLLDAICERLVSSLSTQGTYIVREGDPVTEMLFIIRGKLESSTTNGGR
IGFFNSITLRPGDFCGEELLAWALLPKSTLNLPSSTRTVRSLDEVEAFALRAEDLKFVAN
QFRRLHSKKLQHTFRFYSYHWRTWAACFIQVAWRRFKKRLLAKNLSMVESFSYNYDKHEE
ADEAEEEKEDYPNTTNATSNTFQVRQNLGVTILASRFAANTRRGAQKIKDVQLPKLLKPE
EPDFSIEPEDD
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atggagttgaagaaagataagctagtgaggttttatgataatgagaaacaagatgttcaa
ttttcatgggaaaaaagtgacacccaaaaacactcaaaagagcacaaagtctcagcagca
gcagcccctctgttaattcctgaaggcagcactgctgctgttgttagagctaaacctcac
agatttgggagttttaaggttttcccagagagccatgagccatacaagaagaaaattatt
gatccaggaagtgacattttcttgcaatggaataggattttcctcttttcttgcttggtg
gcgctgttcgttgatccgctctttttctaccttccttctgtgctgaatgatggtagctca
tcttgtgtggcaactgacttgaacttgggaattgttgtgacttgttttcgcactcttgcc
gatatgttctacctgttgcacatgttcattaagttaaggacagcttatgtatctccgagt
tcaagagttttcgggaggggtgaacttgttatggatcccaacaagatagcaagaaggtat
ttgagaacggatttcttcatagatctcatagctgcactgcctctccctcagattgtgata
tggtttattatacctgcagttagaagctcccatagtaccaataatgcccttgtactgatt
gttctgctccaatatgttccaagattatatcttatttttccattaagttctcagattatc
aaagccactggtgtagtcacaaagacagcttgggctggggctgcatataatctcatcctc
tacatgttagccagtcatgtcttgggggcatcatggtatttgttgtccatcgaacggtac
atgacatgctggaagtcagaatgcagaaaggaattcagccccatgaaatgtttcctcggc
tacttggattgtggtaatttgaacaacgatgatcgccgcagatggatgaacagcactcaa
gtgtttagcaactgcaacccagaaaacaccatcgatttcaattatggcatttttgagaat
gcaatgactaaaaatgtggtctccacagagtttcttcagaagtacttctattgtctttgg
tggggcttacagaacttgagctcctatgggcagactttgactacaagcacatttattggg
gaaacttcttttgccatactcattgctatcttgggtctggttctgtttgctcacttaatt
ggaaatatgcagacctatttgcaatccatcactgtgagacttgaggagtggaggctcaaa
cggagggacacagaggagtggatgaaacatcgccagctcccccgagatctgcaagagcgt
gtaaggcgattcgtgcagtacaagtgggttgccactcgaggagttgatgaagaatcaatc
ttacatgccttgcctactgatcttcgtcgtgatatccaacgccacctatgtttagatctt
gttcgacgcgtcccctttttctcacagatggatggtcagcttcttgacgccatatgcgag
cgtttagtatcctccttaagtactcagggcacctacattgttcgtgaaggcgatcccgtt
acagaaatgcttttcatcatacgagggaagctagagagctcaacaacaaatggaggccgg
ataggtttcttcaactcaattactttgagacctggtgacttttgtggtgaagaattgctt
gcttgggcattgcttcccaaatcaaccctcaacttgccttcttcaacaagaacagttcga
tcccttgatgaagtggaagcctttgcactgagagcagaggacctcaaatttgttgccaac
caatttagacggcttcatagcaagaagctgcagcacacattccgtttctactcttaccat
tggagaacttgggctgcttgcttcattcaggttgcgtggcgccggttcaagaagcgactc
ctggcaaagaacctcagcatggtagagtcattttcatataattatgacaagcatgaagag
gctgatgaggcagaagaagaaaaggaagactaccctaataccactaatgcaacttcaaat
actttccaagtaagacaaaatcttggtgtcacaattctggcttcaaggtttgctgcaaac
actaggagaggagctcagaaaatcaaggatgttcaattgcctaagttgttgaagcctgaa
gagccagacttctcaatagagccagaagatgactag
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