Prunus mume (Japanese apricot): 103320115
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Entry
103320115 CDS
T03196
Name
(RefSeq) oligouridylate-binding protein 1-like
KO
K13201
nucleolysin TIA-1/TIAR
Organism
pmum
Prunus mume (Japanese apricot)
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmum03019
]
103320115
03041 Spliceosome [BR:
pmum03041
]
103320115
Messenger RNA biogenesis [BR:
pmum03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
103320115
Spliceosome [BR:
pmum03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
103320115
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
RRM_5
RRM_DEAH11
RRM_8
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
103320115
NCBI-ProteinID:
XP_008219963
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Position
LG2:9010450..9014637
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AA seq
420 aa
AA seq
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MQQRLKLQQQQQQEAIMQQALLQQQQQQHMYHPGVLAAAMSQMEPIPSGNLPPGFDPSTC
HSVYVGNIHVNVTDKLLAEVFQSVGPLAGCKLIRKDKSSYGFVDYHDRNSAALAIMTLHG
RQLYGQALKVNWAYANSQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWD
HKTGRSKGYGFVSFRNQQDAQSAINDLTGKWLGNRQIRCNWATKSAGSNEEKQSSDTQNA
VVLTNGSSDGGQENSNEEAPENNQAYTTVYVGNLSHEVTQAELHSQFHALGAGVIEEVRV
QRDKGFGFVRYNTHEEAALAIQMANGRIIHGKSMKCSWGSKPTPPGITSNPLPPPAQPYQ
ILPAAGMNQGYSPADLLAYRRQLALSQAAATSMALNSGGSQPMYEGYPNSSSGQQLMYYR
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgcaacaaagattgaagcttcagcaacagcaacaacaagaagccataatgcagcaagct
cttcttcagcaacaacaacaacagcacatgtaccatcctggtgtgcttgccgctgccatg
tctcagatggagcctatcccaagtggaaatctgcctcccggatttgacccatctacatgc
cacagtgtgtatgttggaaacattcacgtaaatgtcaccgataagcttcttgctgaagtt
ttccagagtgttggtcctcttgcaggatgcaagctcatcagaaaggataagtcatcatat
ggatttgttgactaccatgatcgaaattcggcagcccttgcaataatgacattgcatgga
cgccaactttacggtcaggcacttaaagtgaattgggcatatgccaatagccagagggag
gatacttcagggcacttcaatatatttgttggtgatcttagtccagaggttacagatgca
actttatttgcttgcttctcggtctatcctagttgttctgatgcaagggtcatgtgggat
cacaaaactggccgctcaaagggatatggttttgtttctttccgtaaccagcaggatgct
cagagtgctatcaatgatttaaccggtaaatggcttggaaatagacaaataagatgcaac
tgggcaactaagagtgctggctccaatgaagagaagcagagtagtgacactcaaaatgcc
gttgtacttactaatggatcttcagatggaggtcaggagaattccaatgaagaggcccct
gaaaataatcaagcatacactactgtctatgttggcaacctctcccatgaggttactcaa
gctgaacttcatagtcagtttcatgctcttggggctggggttattgaagaagtacgtgtg
cagagggataaaggtttcggatttgtgagatacaacactcatgaagaagcagccttggcc
attcaaatggcaaatggcaggataattcatggaaagtccatgaagtgttcatggggtagc
aagccaactcctcccgggataacttcgaatccgctgcctcctcctgcccaaccctatcag
atccttccggctgctggtatgaaccaaggctattctccagctgacttgttggcttatcgt
cgccaacttgccttaagtcaggctgcagccacgtccatggccttgaactctggtggatcc
caacctatgtatgagggatatcctaacagttcatcaggtcagcagctaatgtattatcgt
taa
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