KEGG   Prunus mume (Japanese apricot): 103320159
Entry
103320159         CDS       T03196                                 
Name
(RefSeq) helicase and polymerase-containing protein TEBICHI
  KO
K02349  DNA polymerase theta [EC:2.7.7.7]
Organism
pmum  Prunus mume (Japanese apricot)
Brite
KEGG Orthology (KO) [BR:pmum00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pmum03400]
    103320159
Enzymes [BR:pmum01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     103320159
DNA repair and recombination proteins [BR:pmum03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   DNA polymerases
    103320159
SSDB
Motif
Pfam: DNA_pol_A POLQ_helical HTH_61 DEAD Helicase_C Herpes_capsid HHH_5 ResIII
Other DBs
NCBI-GeneID: 103320159
NCBI-ProteinID: XP_008220013
LinkDB
Position
LG2:9177540..9192328
AA seq 2169 aa
MASPPRSRINQFFVSKKRKPLSPVLKSGRNEKDVKVKVEGSPSAKGTLDNYLLASQENNI
TSEPSYKVCDSLAQQDQVRRNLTSEIDNSLKDEFKQLPLSSQLHSEANDVSQANQKETSR
GLTKVGDVKEYPAFTEGEDRAELKDFAADFLSLYCSDLRPNESSLSELKVNDHKRQASPS
LLDREDKTFKKRHCITNQSHVEHETSYSSEKSSEAMQSVCVDKNGVTIVNELLELQPTLK
ACSNTAKLSLDMFECYTPGSLTRKTSVRETPKSTRGSSSFSPGEAFWDDAIQLADGLCAQ
AAEVISVADGQYRSKSSCNLRNARCDGKSKEILDEGEWMGKGGDTGPMGKHRKDLDKEVS
PLPVKHFDFSCEDKNLDKSVPHHLDAYNLKSAAHVGGEQSESSLRDPRGLRNTMMIRCNK
SQENQVTFRDQYTNSVNAVTNMKLDLTGKDITSYSPVDEVVKLTGNHESDEASTPSSFVP
LKDHLDLNSWLPPEICSLYRKKGISKLYPWQVDCLQVEGVLQRRNLVYCASTSAGKSFVA
EILMLRRVLSSGTMAILVLPYVSICAEKAAHLDVLLEPLGKHVRSYYGNQGGGTLPKDTS
VAVCTIEKANFLINRLLEEGRLSEIGIIVIDELHMVGDPSRGYLLELLLTKLRYAAGEGN
SESSSGESSGMSSCKADPAHGLQIVGMSATMPNVAAVADWLQAALYQTEFRPVPLEEYIK
VGNTLYNKKMEIVKTIPKATDLSGKDPDHVVELCNEVVQEGLSVLIFCSSRKGCESTARH
VSRFLKKFSVNIRSDDSEFKDVTLAIDALRRCPAGLDPVLEETLPAGVAYHHAGLTVEER
EIVETCYRRGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRAGRTG
IDTKGESVLICKPEEIKRIMGIINESCLPLRSCLSEDMNGMTHAILEVVAGGMVQTANDI
HRYVRCTLLNSTKPFQDVVKSAQESLRWLCHRKFVEWNDDTKLYSTTPLGRAAFGSSLCP
EESLIVLDDLSRAREGFVLASDLHLVYLVTPINVDMEPDWELYYERFMELSALDQSVGNR
VGVTEPFLMRMAHGAPMRSSNRFRENMKALHGKYENRPGITNNTVLLDDQILRVCKRFYV
ALILSRLVQEAAITEVCEAFKVARGMVQALQENAGRFASMVTMFCERLGWHDLEGLVCKF
QNRVSFGVRAEIVELTTIPYVKGSRARSLYKAGLRTPLAIAEASVAEIVKALFESSSWTE
QEGSAQRRIHLGVAKKIKNGAHKIVLEKAEEARVAAFSAFKALGLDVPQFYRPVFSSGGG
SSSMQGAGNSSGDNSTSSFPIVERMEHAAKPSLEGRVLSGKVALESREKLTKTSDIGGVA
SAEVYSTGVMQIKFGPDNSTVSIQGSATLGDELKAAFDQNKNADLTDHVQLQSLGDRTRV
SDESFDLEKQERCKRVNLSPGFKGNACDKGPIHAINTLGGFDSFLDMWETTSEFYFDIHY
NKRSELNSVAPFEIHGIAICWENSPVYYVNIPKDLLWSDNSENKCLHLSGSGNRSNVLPL
DDMLEMARRRWKRIGEIMGKRGVRKFAWKLKIQIQALKSPAVHAQRFGCQNIAGKSTCFE
IIDNSLLLLPPVHIKDGIDMCIVAWILWPDEERSSNPNLEKEVKKRLSSEAAAAANRNGR
WKNQMRRAAHNGCCRRVAQIRALCSVLWKLLVSEGLTEALVNIEIPLVNILADMELWGVG
LDMEGCLQSRKVLGKKLRQLEKEAYKLAGMTFSLYTAADIANVLYGHLKLPIPEGRNKGK
QHPSTDKHCLDLLRDEHPIIPVIKEHRTLAKLLNCTLGSICSLGRLSMKTQKYTLHGHWL
QTSTATGRLSMEEPNLQCVEHMVDFKIHKDEKGSETNVDYYNINARDYFIPTQDNWLMLT
ADYSQIELRLMAHFSKDSALIEPLSKPEGDVFTIIAARWTGISEDSVSSHVRDQTKRLVY
GILYGMGANSLAEQLDCSPEEASEKIQNFKSSFPGVASWLNEAVAYCRKKGYIETLKGRK
RFLSKIKFGNSKEKSKAQRQAVNSICQGSAADIIKIAMINIYSVIVEGVERPNSTSQLAT
KLHILKGRCRILLQVHDELVLEVDPSVIKEAALLLRTSMENAVSLLVPLQVKLKVGKSWG
SLQPFQANH
NT seq 6510 nt   +upstreamnt  +downstreamnt
atggcgtcgcctcctcggtcgcgcatcaatcagttttttgtttcaaagaaaaggaagcct
ttatcacctgttctgaagtctgggagaaatgaaaaagatgtcaaagttaaggtagaaggt
tctcccagtgccaaaggcactttggacaactacttgctggcttcacaggaaaataatatc
acttcggagccttcttacaaagtttgtgattccttagcccagcaagaccaagttagaagg
aatttgacatcagagattgataattccttgaaagatgaatttaaacagctccctttgtct
tctcaactgcactctgaagctaatgatgtttcccaagcaaatcagaaggaaacatcaagg
ggattaaccaaggtgggtgatgtgaaggagtacccagctttcacagaaggcgaagatcgt
gcagagctcaaagactttgcagcagattttttgtctttgtattgcagtgatcttcgaccg
aatgaaagttctctgtcagagctgaaggtgaatgaccataagagacaagctagcccatct
ttgcttgaccgggaggataagacatttaaaaagaggcattgcattaccaatcagtcacat
gtggaacatgaaaccagttactctagtgagaagagttctgaagccatgcagtctgtttgt
gttgataaaaatggggttaccattgttaatgaactgctcgagcttcaaccaaccctgaaa
gcatgcagtaatacagcaaaactatctctagacatgtttgaatgctatacaccaggctcg
ctgactagaaaaactagtgttcgtgaaacccccaagtcgacacgtggaagctcatcattt
tcacctggagaagctttttgggatgatgcaattcaacttgccgatggtctgtgtgcacag
gcagcagaagtaattagtgttgcagatggccaatatcgtagtaaaagttcatgcaatttg
agaaatgcacgctgtgacggcaagtcaaaggaaattctggatgaaggtgagtggatgggt
aagggtggtgatacagggccaatggggaagcatagaaaggatttagataaagaagtgtcc
ccactgcctgttaaacattttgatttctcttgtgaggacaaaaatttggataaaagtgta
ccacatcatttggatgcatacaacttaaagagtgcggctcatgtgggtggcgagcaatct
gaatccagtcttagagaccctagaggtctgagaaatactatgatgatccgttgcaacaaa
tctcaggaaaatcaagtgacgtttagagatcaatatacaaattctgttaatgcagtcacc
aacatgaaattagatttgacaggcaaggatattacatcttattcaccagttgatgaagtc
gtgaagttgactggtaaccatgaatctgacgaagcaagtactccttcaagttttgtgcca
ctcaaagatcatctagatctgaacagttggcttccaccagaaatatgcagcctatataga
aagaaaggaatttcaaaactttatccttggcaggttgactgccttcaggtggaaggtgta
ttgcagagaaggaatcttgtgtattgcgcatcaacaagtgctggcaaaagttttgttgca
gaaattctaatgttgcggagggtcttatcatcgggaacaatggctatacttgtacttcct
tatgtatcaatttgtgcagaaaaggcagcacatttggacgtacttcttgaaccacttggt
aagcatgttcgtagttactatggaaaccaaggtggtggaacacttcccaaagatacttct
gtagctgtctgcacaatagaaaaggcaaactttttgataaacaggctgctggaagagggt
cgtctttcagaaattggaattattgtaatagatgaactgcacatggttggcgatccaagt
aggggttatcttctggaacttttgttgacaaaacttcgttatgcagctggtgaaggaaat
tctgaatcaagtagtggagaaagttcaggtatgagcagttgtaaggctgaccctgctcat
ggtctccaaattgttgggatgagtgcaactatgccaaatgtggcagcagttgctgattgg
cttcaggctgcactgtaccagacagaatttcgacccgtgccattagaagaatatattaaa
gtcggtaacaccctatataacaagaaaatggaaattgttaaaacgatccccaaagcaact
gaccttagtggtaaagatcctgatcatgttgtggaactgtgcaatgaggttgttcaagag
ggtctttccgtgttgatattctgctctagtcgaaaaggatgtgaatcaactgcgaggcat
gtttcaagatttctcaagaaattttcagttaacattcgcagtgatgacagtgaatttaag
gatgtcacgttggctattgatgccttacgaaggtgtcctgccggtctggatccagtttta
gaagaaactcttcctgctggtgttgcttatcaccatgctgggctcacggttgaggagaga
gagattgtcgaaacttgctaccgtagaggccttgtacgtgtcttaactgctacatctacc
ttagcagctggggttaatttgccagctaggagggtcatttttcgccagcccaggattggt
cgtgattttattgatgggacaaggtacagacagatggctggtcgggctggtcgaactgga
atagatacaaagggagaaagtgtacttatttgcaagccagaagagataaaaagaatcatg
ggaattattaatgaaagctgtctgccattgcgttcttgtctatctgaagatatgaatgga
atgacccatgcaatcttagaagttgtagctgggggaatggttcaaactgctaatgacatt
catcgatatgttaggtgcacacttctaaactccactaaaccttttcaggatgtggtgaaa
tcagcacaggaatccctgcggtggttatgccacaggaaatttgtagaatggaatgacgat
actaagttatacagtactacacctcttggacgtgcagcatttggcagttccctatgccct
gaagaatcacttattgtgctggatgatctttcaagagcaagagaagggtttgtgcttgca
tctgatttgcatttagtttacctagtaacaccaataaatgttgatatggagcctgattgg
gaactgtattatgaacgattcatggaattgtctgctcttgaccagtctgttggcaatcgt
gttggagtgacagaaccttttttgatgcgcatggcacatggtgcacctatgcgttcatca
aacaggtttagagaaaatatgaaagcgttgcatggaaagtatgaaaaccgacctggaatc
acaaacaatactgtgcttctggatgatcagatacttcgagtgtgtaaacggttctatgtt
gctctcatcctttcaagactagttcaggaagctgctatcactgaggtatgtgaagcattc
aaagtggccagaggtatggtgcaggccttacaagagaatgctggaaggtttgcttctatg
gtgaccatgttttgtgagaggcttggatggcatgatctcgaaggcttggtttgcaagttc
caaaatcgtgtttcattcggagtaagagcagagattgtagagcttactacaattccatat
gttaagggttctcgagcaaggtcactctataaagctggcttgcgtacgcctttagcaatt
gctgaagcatccgttgctgaaatagttaaagctctttttgaatcttcatcatggactgaa
caagaaggttcagctcaaaggcgcatccatttaggagtagccaagaagatcaagaacggt
gcacacaaaatagttcttgaaaaggctgaagaggcaagagttgctgccttctcagctttt
aaagcacttggattggatgtcccacaattttatcgacctgtattttcatctggtggtgga
agttccagtatgcaaggagcaggaaattcctctggtgataactccactagtagctttcct
attgttgagcgcatggagcatgctgctaagccatctttggaaggaagggttctttctgga
aaggttgcactagaaagcagagaaaagttgacgaaaacatcagatattggtggggtggct
tcagccgaagtatattcaactggtgtcatgcaaattaagtttggtcctgataattctaca
gtatcaattcaagggtctgctacccttggggatgagcttaaggcggcttttgatcagaac
aaaaatgctgatttgactgaccatgttcagttacaaagcttaggtgatagaactagggta
tctgatgagtcttttgatcttgaaaaacaggaacgctgtaaaagggtgaacttgtctcct
ggatttaagggcaatgcttgtgacaaaggccctattcatgcaattaatactcttggtgga
tttgattcctttttggatatgtgggaaaccacctcagagttctattttgatattcactac
aacaaaagatcagaattgaactctgttgccccctttgaaatacatggcatagccatctgt
tgggaaaattctcctgtgtattatgtcaatattcctaaggatctgctgtggtctgacaat
agtgaaaataaatgcttgcatttgagtggatcaggcaatagaagtaatgtgttacctctt
gatgatatgttggagatggctagacgtagatggaaaaggattggtgaaataatggggaaa
agaggtgttagaaaatttgcttggaagttgaaaattcagattcaggcacttaaaagtcct
gcagttcatgctcagagatttggttgccaaaatattgcagggaaaagtacttgttttgaa
atcatagacaactcgttgttattgttgcctccagttcatataaaagatggaattgacatg
tgcattgtggcctggattctttggcctgatgaggagagaagctctaatcctaacctggaa
aaggaagttaagaaaaggttatccagtgaggctgcagcagctgcaaatcggaatggcagg
tggaagaatcagatgcgaagagctgcacataatggttgctgccgtcgggttgcacaaata
cgagccttatgttctgttctttggaagttacttgtttctgaaggccttactgaggcactt
gtaaatatagaaatcccgttggttaatattcttgccgacatggagctgtggggagtgggt
cttgacatggagggatgcctgcaatcacgcaaggtgttggggaaaaagctaaggcagctt
gagaaggaagcttataaactggctggcatgacattttcattatatacagcagcagatatt
gctaatgtgttgtatggacacttaaagctgcccataccagaagggcgcaataaggggaaa
caacatccaagtacggacaagcattgcttagatttattaagggacgagcatcctattatt
cccgtcattaaagagcaccggacattggcaaaactcttaaactgtacattgggatcaatt
tgttcactcggtaggctatccatgaagacacagaagtacacattacatggtcattggctc
caaacatcaacagcaactggtcggctttcaatggaggaacctaatctccagtgtgttgaa
catatggttgacttcaaaatacataaggatgaaaaaggaagcgaaactaatgttgattat
tacaacattaatgctcgggattactttattcctactcaggacaactggttaatgttaact
gcagattattctcagatagaattgcggctgatggcacatttctctaaagactcggcactt
attgaaccccttagtaagcccgaaggtgatgtcttcaccatcatagcagctagatggact
gggatttcagaagattctgttagttctcatgtacgagatcagaccaaaaggttggtgtat
ggcattctttatggaatgggtgctaacagccttgcagaacaactcgactgcagtccagaa
gaagcttctgaaaaaatacaaaactttaaaagttcttttcctggagttgcttcttggctc
aatgaagcagttgcatattgccgtaagaaaggatacatcgaaacccttaagggaagaaaa
cgatttttgtcaaaaataaaatttggaaacagtaaagaaaagtcgaaggctcagagacaa
gctgtgaattctatatgtcagggatctgctgctgacataatcaagattgcaatgataaat
atatactccgtgatagtagaaggagttgaaaggcccaattctacttctcaacttgcaaca
aagttacatatactgaagggccgctgcagaattttattacaggtacatgatgaattagta
ctggaagttgatccttctgtgataaaggaagctgctttgctgttacggacaagcatggaa
aatgctgtttcgcttcttgttcccttgcaagtgaaattgaaagttggaaaatcgtggggt
tctttgcaacctttccaggccaatcattaa

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