Prunus mume (Japanese apricot): 103320217
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Entry
103320217 CDS
T03196
Name
(RefSeq) nuclear pore complex protein NUP85
KO
K14304
nuclear pore complex protein Nup85
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
103320217
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmum03019
]
103320217
03036 Chromosome and associated proteins [BR:
pmum03036
]
103320217
Messenger RNA biogenesis [BR:
pmum03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
103320217
Chromosome and associated proteins [BR:
pmum03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
103320217
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleopor_Nup85
Motif
Other DBs
NCBI-GeneID:
103320217
NCBI-ProteinID:
XP_008220081
LinkDB
All DBs
Position
LG2:complement(9532310..9539186)
Genome browser
AA seq
724 aa
AA seq
DB search
MPDVASGSGDTRCARGSNDSSLVPYSPELRQPVVYSLHHGLKPPIGRLSISWSRGNNLRV
SVLRPPSAEDSDDVEVGGRVVEVRLSNGDGETGDAKWRRIAYGSGPPFALLQSRRSSVAS
LSKMSMSPSPYNIDWWEYVMEYSKDINSLLGDSKAPPNPVIDDPKTVLRNVEEPTSLKAA
WELMEMFYADKQCQSWLPERLVDWLADYDSLLSSTQPTVHSKLVDFQNELVGLQVIEDNP
KYWEVLSSALAVGWIEIVVKMLRLHGSYQFHQLGNREIENGLVETVSFLISKMPRMRPEV
EDGRLGECYKAKPDFVKAWEKWRGKITKLDCSAFWLQCDHRQTREGLKNMIQIMLGNTDN
ICNVTCHWIELFISHFLYVRPFTVGLESMYSLAQKCMQLKPMSSAHGLIAIILGILGENT
EVILAECSRVFGPWMVAHAIELLTTGSDEAEFLLQEERHSLGGISIAELHRLVYAQVLSS
HPLTWQIAPIYLTSCMKQGMGLLEILLYKLPIQHNETLLKNLEICRLYELDTVSSNIMKI
AGVYHWKHGRKGSGVFWLQQARDEIRLSRIAQHLFDSVGKSISDESFKQWEGLIELLGSE
SKTTGGLEFLHKYRDFKKSLKQVYGGKTTDTARQAVESLISLMKNPSTPQRFWLPLLHDS
LKLLNWQERPLLNVFQTSLLLNKLQELSMAKLRPDFIEADLPPQALSSVRLALATNLGRA
ILEE
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgccagacgtcgcctctggctccggcgatacgcgctgcgcccgaggctccaacgacagt
tctctggtcccatactcgccggagctccggcaacccgtcgtctattcacttcaccacggc
ctcaagcctccgatcggtcgcctttccatctcgtggtcccggggcaacaatttgcgcgtg
tcggttctccggccaccgtccgcagaagactctgacgacgtcgaagttggcgggagagtt
gtggaggtgaggctcagtaatggagacggcgaaactggtgatgcgaagtggcggaggatc
gcgtacggttccggtccaccattcgcgcttctccagagccggaggagctctgtcgcgagc
ttatcgaagatgtcaatgagtccgtcgccgtataacatcgattggtgggagtatgtgatg
gagtacagcaaggacataaattcacttctcggggactcaaaggcgcctcctaatccagtg
attgacgacccgaagacagttttaaggaacgttgaggagcctacctctttaaaagctgcg
tgggagctaatggagatgttttatgctgacaaacaatgccaatcatggctaccagaaagg
cttgttgattggttggccgattatgatagtctactttcgagtacacagccaactgtccat
tcgaagcttgtggattttcaaaatgaacttgtcgggttacaggttattgaggacaatcct
aaatattgggaagtgttatcatcagcactagcagttggctggattgagattgtggtgaaa
atgttgcggttacatggatcttatcaattccatcagcttggcaaccgtgagatagagaat
ggacttgtagagacagtttcttttcttatttcaaagatgccacgcatgcgtcctgaagta
gaagatggaaggttaggtgaatgctacaaagcaaagcccgattttgtcaaggcatgggag
aaatggagagggaaaattactaaactcgactgcagtgcattctggcttcaatgtgatcac
cgtcaaacccgggagggattgaaaaatatgatacaaattatgctaggaaacactgacaat
atctgcaatgtaacttgccattggatagagctgtttatttctcactttctctatgtcagg
ccattcacagtgggtcttgaaagcatgtatagcctagcccagaaatgcatgcagttgaaa
ccaatgtctagtgcccatgggttgatagcaattattcttggaatccttggggaaaatact
gaggttatcttagcggaatgctcaagagtatttgggccttggatggttgcccatgccatt
gagttgttgaccactgggagtgatgaagcagaatttcttctacaggaagaacgccatagc
ttggggggaattagtatagcagagttacatcgacttgtctatgctcaagttctatcatca
catccattgacttggcaaattgctccaatttatttgacatcgtgcatgaaacagggaatg
ggtttgttagagattctattgtataagctgcctattcaacataatgaaacacttcttaag
aatttagagatatgccgactttatgaacttgataccgttagttcaaacattatgaagatt
gctggcgtgtaccattggaagcatggtaggaaaggttctggagttttttggctacagcaa
gccagagatgaaattcgtcttagcaggattgctcagcatttgtttgattcagttggaaag
tcaatctctgatgaaagttttaagcaatgggaaggcttgattgaattgttgggttcagaa
tccaagactacggggggtcttgaatttttgcacaagtatcgggacttcaaaaagtccctt
aagcaggtttatggtggaaaaactactgacactgctcggcaagctgtagaatctttgata
tcgcttatgaaaaacccatctacacctcagcgcttttggctgcctcttctgcatgactcg
ttaaagctgcttaactggcaggagcgccctctgctaaatgtctttcagacaagcctcttg
ttgaataaactgcaagagttgtccatggctaagctccgccctgacttcatcgaagcagac
ttgccaccacaggccctcagttctgtaagattagctcttgctacaaatctaggacgtgcc
atcttggaggagtaa
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