Prunus mume (Japanese apricot): 103320291
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Entry
103320291 CDS
T03196
Name
(RefSeq) ATP-dependent RNA helicase DEAH13-like
KO
K14780
ATP-dependent RNA helicase DHX37/DHR1 [EC:
5.6.2.6
]
Organism
pmum
Prunus mume (Japanese apricot)
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pmum03009
]
103320291
Enzymes [BR:
pmum01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
103320291
Ribosome biogenesis [BR:
pmum03009
]
Eukaryotic type
90S particles
Helicases
103320291
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
DHX37_C
Helicase_C
DEAD
HA2_C
HA2_N
nSTAND3
ResIII
AAA_22
ATPase
Sigma54_activat
NACHT
AAA_19
Motif
Other DBs
NCBI-GeneID:
103320291
NCBI-ProteinID:
XP_008220178
LinkDB
All DBs
Position
LG2:complement(9642662..9647231)
Genome browser
AA seq
1089 aa
AA seq
DB search
MSKSQKRKRNKLEVESKYAKRRKAIQFPKAGFKKNNGDCACSDQTEPDHQLEKTQSRQDL
DEIHEDKVKESPKVNSSSRASELSEFPGARPLITPTIVHVSRPDEVEEARKDLPIVMMEQ
EIMEAINENSTVIIRGETGCGKTTQVPQFLFEAGYGSSHSNSARSGIIGVTQPRRVAAYA
TAERVAYELGLNLGKEVGFQVRHDKRMSKSSCSIKFMTDGILLQELKSDFLLKQYAVIIL
DEVHVRSSNTDILIGMLSRVIVQRQKEYENQQKAVLLGKNVSREQQIFPLKLVLMSATLR
EDFIRKLFGETPIIEVPTRQFSVKAYYENRTEEEGDYVEKACKKVLKIHKRLPHGGILVF
VTGKREVERLCRKLQGASRALMKRSVESDTDEVSDIDSVEDELEGYSHDSETESEREFFR
DDDRDSLCQDTPGLVDGTVAEVVGEDGSIVSPKAGFDSWAGKSSLCCNSAGKKGSFLGAL
HVVPLYARLNAEAQLTEIEKVKEGERLVVVGTNVAETSLTISGIKYVVDTGKEKVKEYNS
NGMETYKIQWISKASADQRKGRAGRTGPGHCYRLYSQAVYYNKFPDFSAPEISKVPFDGV
ALLLKSMNILKISNFPFPTPPEAGAVDEAECLLTALEASDTNGRLTPLGHSMACYPLRPR
HSRMLLTIFQIMSKQKNHARANLVLAYAVAAVASLSCSNPFLRQFEDIHTTNHEIVCSDA
PFEHSNQEKLTRKKLKETLKVPRERFFNPSSDALSRAYALQCYEISKRPVEFCNDNALHP
KTMEEISKLRKQLLERVFEQSGVSGGEKEFSWSYGSMEDVEGDWRVSYDKNPLSLYEEEL
LGQAICAGWADRVAKRIRGRSSSVSSDLGDGKVRAVRYQACMVKETVFLDPWSSVCNSAP
EFLVYNELIQTRSGPYMYGVARVKSEWLVEHARALCTFSAPPTDTKPYYEPLTDQVFCYV
IPAFGSHLWELPPFGLPMNKFDQFRDRVKAFAYALLQGQVLPCLKVVRKCMAEPPGNVLK
PEAAGRRRVGNLLEKLMRNKIHNCAALRQVWKENRMELHPEFLAWFNKSFQTSSFEALWS
LMLREVVLE
NT seq
3270 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaatcccagaaaagaaagcgcaacaagttggaggttgaatccaaatatgcaaaa
cgcaggaaagctatacaattcccaaaagctggatttaaaaagaataacggtgactgtgct
tgtagtgatcaaactgagcctgatcatcagttagaaaaaactcaatcaaggcaggatttg
gatgagattcatgaggacaaagtaaaagagagcccaaaagtaaattccagcagcagagca
agtgaattatcagaatttcctggagcaaggcctctaattacaccaactatagtgcatgta
tcaaggcctgatgaagttgaagaagcaaggaaggatcttccaatagtaatgatggagcag
gagatcatggaggccattaatgaaaattccactgtgattatacgtggagagactggatgt
ggtaaaacaacccaagttcctcagtttctttttgaagctggctatggttcaagccactct
aattctgcccgaagtggtattattggtgtaactcaaccccgccgtgttgcagcctatgcc
acggctgagcgagtggcgtatgagcttggactgaatttaggtaaagaggtcggctttcaa
gttagacatgacaaaaggatgagtaaaagtagttgctccatcaaattcatgacagacgga
atattactacaagaactcaagagtgattttttgctgaagcaatacgctgtcataattctt
gatgaagtccatgtgcggagctcgaacaccgacatacttatcggaatgctttcacgtgtt
attgtacagcgtcagaaagaatatgaaaaccagcaaaaggcggtgcttttggggaaaaac
gtaagtcgtgaacaacagatcttccctttaaagcttgtgctgatgagtgccaccttgcga
gaagactttatcagaaagctgtttggtgaaaccccgatcatagaagttcccactagacaa
ttttcagtaaaagcttactacgaaaacagaaccgaggaagaaggggattatgttgagaaa
gcatgtaaaaaagtcttgaagattcacaagagactgccacatgggggcatacttgtgttt
gtcactgggaagcgagaagttgagcgcttgtgtcgaaagctacaaggagcttcaagggca
cttatgaaaagatcagttgagagtgatactgatgaagtttctgatattgattctgttgag
gatgagttggagggttattcgcatgattcagaaacagaaagtgaacgagaattttttcgc
gatgacgatagggattcattgtgccaagataccccaggattagttgatggaactgtggcc
gaggttgtaggagaggatggtagcattgtatcaccgaaagctggtttcgattcttgggct
ggaaaatcttcattgtgctgcaattcagctgggaaaaagggtagttttctaggcgcactg
catgttgtccctctttatgccaggctgaatgcagaagctcaacttacagaaatagaaaaa
gtgaaggagggagaacggcttgttgttgtaggcacaaatgtggctgaaacctctttaact
ataagcgggataaagtatgttgttgatactgggaaagagaaagtgaaggaatacaattca
aatggcatggaaacatataaaatacagtggattagcaaggcatcagctgatcagcgtaaa
ggaagagctggaagaacaggacctggccactgttaccgcctgtattctcaagcagtgtat
tataacaaattccctgatttttccgcacccgaaatatccaaagtcccctttgatggtgtt
gcccttcttctgaagtctatgaatattcttaagatatccaattttccatttccaactcct
ccagaggctggtgctgtggatgaagcagagtgtctcttgacggcccttgaagcaagtgac
acaaatggaagattaacacctttagggcattccatggcttgttatcccctgcgtcctcgt
cactctcggatgctccttacgatttttcaaatcatgagtaaacagaaaaatcatgctcga
gctaatttggtgttagcatatgcagttgcagcagttgcatctttgagttgttcaaatcct
tttctcaggcagtttgaagatattcacactacaaaccatgaaattgtttgcagcgatgcg
cctttcgagcattcaaatcaagagaagttgacaaggaagaaactaaaagaaactctaaaa
gtgcctcgtgaaaggtttttcaatcccagcagtgatgctctgtccagagcctatgctttg
cagtgctatgaaatatctaagaggccagtggaattctgcaatgacaatgctctgcacccg
aaaaccatggaagaaatatccaagctgagaaagcagctcctcgaacgtgtctttgaacaa
agtggcgtttctggtggggagaaagaattttcatggagctatggtagcatggaagatgta
gaaggtgattggagggtttcctatgacaagaaccctctttcgttgtatgaggaagagctc
ttgggccaagccatctgtgctggttgggcagacagggttgctaagcgcattagaggaagg
agttcatcagtgtcatctgatttaggagatggaaaagttcgtgccgttcgatatcaagcc
tgcatggttaaagagactgtgttcctcgacccttggtcatctgtttgtaattcagcccct
gaatttctggtatacaatgaactaatccagacaagatcaggaccgtacatgtacggcgtt
gctcgtgtaaaatcagaatggcttgttgagcatgcccgggctttatgcactttctctgca
cccccaacagataccaaaccttactacgagcctctaactgatcaagtattttgttatgtc
attccagccttcggttctcatttgtgggagcttccaccatttggtttgccaatgaataaa
tttgatcagtttcgagatcgagtgaaagcttttgcttatgctttgcttcaaggccaggtt
ttgccttgcttaaaagttgttcgtaagtgtatggcagaacctcctggtaatgttttaaag
ccggaggcagctggtcgacggcgggttgggaatcttttagagaagctgatgagaaacaag
attcataactgcgctgcgttaagacaggtgtggaaggagaatcgcatggagttgcatcca
gaattcctcgcctggtttaataagagtttccaaactagcagctttgaagccctttggtca
ctcatgcttcgtgaagttgttttagagtga
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integrated database retrieval system
