Prunus mume (Japanese apricot): 103320338
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Entry
103320338 CDS
T03196
Name
(RefSeq) nuclear pore complex protein NUP214 isoform X1
KO
K14317
nuclear pore complex protein Nup214
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
103320338
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmum03019
]
103320338
Messenger RNA biogenesis [BR:
pmum03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
103320338
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAPA-1
Motif
Other DBs
NCBI-GeneID:
103320338
NCBI-ProteinID:
XP_008220268
LinkDB
All DBs
Position
LG1:431368..445543
Genome browser
AA seq
1788 aa
AA seq
DB search
MSDDAKMIKVEEEIEGERVGSNDYIFERIGEPVPIQRDESCFDPQGSPSRPLAVSEKHGL
VFVAHSSGFCVARTKDVMASAAEIKERGSSSSIQELSVVDVPLPNLNILELSTDSSTLAA
TADANIHFFSVDSLLDKGLKPSFSCSLNESSSIKDMQWTRKPENFYVVLSNLGKLYHGTV
GGPMKDVMDNVDAVGWSLKGKLIAVARRDILSILSSNFKERLSMLISFKSWTEDSNANCS
IKVDSIRWVRHDSIILGCFQLTADGNEESYLVQVIKIKDGKFADGSCKPVLIPFYDLFSE
LIDDILPSASGPYLLLSYLEQCELAITANRKNVDQHIVYLSWSLGNEKNEVVVVDILRDS
LLPRIELQENDDENLILGLCVDKISRSEKISVRLGEEQRELSPYCILMCLTLEGKLIMFH
VASVSGITVSPAIVSALSDKEEEEEDSTALVRVEGKSSKPSSWLGKEQLEKVSMDAPLGI
ENRKELDRNVGLDFHIKDDIKSLDVNETLTSEFVTNQTINKESTNSNKKVEPLTNSQSFE
ADGQQEVIVPKRYPDKNGNQLQFPGLENRNIRPASTNASLQGVPGHAFRDLIKTETQKIA
GVGTAVKSTLKDTHKSFETVEGSPGKLESTGLEGVSSQSWSSGNVISSKDADVKSPLMPS
NFIEGSRSGNASQIVAPIDAYGKPSGKPLHFKNISGSSTSVNFSDRLTENGGQRPSAAAG
NIVSLPSISSSLMSSQESFSVRKSPNHNIYPSKESYSDLAPSRRLNSEPNLSKQFGNIKE
MTKELDMLLQSIEEPGGFRDACTVNQIGSVEELERGIGTLSDRCRKWKSIMDERLQEIEH
LLDITVQVLARKIYMEGIVKQASDSRYWDFWNCQKLSSELELKRRHILKMNQDLTDQLIQ
LERHFNGLELNKFGENAGAHAGRRALQSQFGPSRHIQSLHSLYSTMTSQLAAADHLSECL
SKQMAALKIESPSVKKQNVKKELFETIGVPYDASFSSPSLGATKVGGTPNEILSFSLGSA
ASKDQPRRNVNAIKNYEPETARRRRDSLDRSWEDYEPTKATVKRLLLQESGKESTSRSSF
PIDKQHFSPRLLEGSAITGPRDHISPATFLHPSENRAGVQGTHLKQPFQSSETPFVRANE
LQGPLQPTGLTSPIMQEHKMSSASQLLPAGWQSFAREPNMTAEKFGNGIPYIEKSESDSV
KEKSVMQSDASQKPSVSLVPTQTPSLLKKPNDMLNSFAKGTLPKQESVKDRPLTATVPSI
EAGKKLNFSLSSSFAVPVATSQPGKVDQPDAATSKSQPGKILPSPTFSMSVSTPSSPVFS
SSSAPLSPLSISPSVMMPSNRSLDSSNTTADVSKPVSTSSLSFPSPIVSSPSFFSFDASK
QLVSSSSPSPVTNSTSESSKTEIQPSLKTDKNANTILPPQECGPSTIETNLKLKPSVSSP
LTIETSTGLASGSPASSNNTAGPTNNVRMNAQQEQPSAGHSPFPTLPTSGSVTGGRTDGF
DVQNAQEDDMDEEAPDTSSTTELSLGSLGGFGLGSAPNPTAPKPNPFGGSFGNAGTNVTS
PFSMTVPSGASGELFRPASFNIQSLQPSQSSQPANSGGFAGGFGTGTTAQAPSPSKFGQP
VQVGPGQQALGSVLGTFGQSRQLGTSLPGTSFGSPGGFGGGITGTNPTGGFSSAATGGFA
GAASAGGGFASLASGGGGFASAGSGGGGFAGAGSGGGGFAGAGSGGGGFVGAASAGSGFT
GAASSGGLPAAGAGFAAFGGQQGSGGFSGFGSAGGTGKPLELFTQMRK
NT seq
5367 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatgatgcgaaaatgattaaagtagaagaagaaattgaaggagagcgtgtgggg
tcgaacgactacattttcgaaaggatcggcgaacccgtcccaattcagcgtgatgaatcc
tgtttcgatccccaaggcagtccctcccggccccttgccgtctccgagaaacacggcctc
gtgtttgttgctcattcctctggattttgcgttgcgaggaccaaagatgttatggcttca
gctgctgagattaaggaaaggggaagctcttcttctatacaggagctaagtgttgtggat
gttccccttcccaacctcaacattctcgaactctctaccgatagttctactcttgccgct
actgctgatgcgaacattcacttcttctcggttgattcccttctcgataagggtctaaaa
ccatctttctcttgttcgctcaatgaatccagctctatcaaggatatgcagtggacgagg
aaacctgaaaacttttatgtggttctttcgaatcttgggaagctatatcatggaacagtt
ggtggccctatgaaagatgtgatggacaatgttgatgctgttggatggagtttaaaagga
aaactaattgctgtggcaagaagggatattcttagcattctatcatctaacttcaaggag
aggttgtcaatgttaatttcgttcaagtcttggactgaagattccaatgcgaactgcagt
ataaaagtggactctatcaggtgggttcgtcatgatagcatcattctaggatgctttcaa
cttactgcagatggaaatgaagaaagttaccttgtccaagtgataaaaataaaagatggc
aagtttgctgatggttcttgcaagccagttctgatacctttctatgatttgttttcggaa
ctcattgacgacattctgccttctgctagtggcccatatttgttattgagctatttggag
caatgtgaacttgcaattactgctaacaggaagaacgtggatcaacatattgtgtatctt
agctggtcgcttggaaatgagaagaatgaagttgtagttgttgatattctccgagatagt
ttgctaccaaggattgagcttcaagaaaatgatgatgaaaatttgatactggggctctgc
gtagataaaatttcaagaagtgagaaaattagtgtccgacttggagaggaacagagagaa
ctctcaccatattgcattcttatgtgtctcacgcttgagggaaaactaatcatgttccat
gttgccagtgtcagtggaattacagtttcacctgctattgtttctgctctttctgacaag
gaagaggaggaagaggattccactgcattggtacgggtagaaggtaagtcatctaaacct
tcttcctggctggggaaggaacaacttgaaaaggtttctatggatgctccattgggtatt
gagaacagaaaagaacttgacagaaatgtaggccttgattttcatataaaagatgacata
aagtctcttgatgtaaatgagactttgacgtctgagtttgttactaatcaaacaattaat
aaagaaagtaccaacagtaacaagaaagtggagccactgacaaattctcaatcatttgaa
gctgatgggcaacaagaagttattgtcccaaagcgctacccggacaaaaatgggaaccaa
ttacagtttccgggactggaaaatagaaatataaggccagcatctactaatgcttctctc
caaggggtgcctggtcatgcgttcagggacttaatcaaaacagaaactcaaaaaattgct
ggagttggaactgctgtaaaatccactttaaaggatacacataaaagttttgagacagtg
gagggatctccaggaaaattggagtcaacaggtttagagggtgtttcatctcagtcctgg
tcaagtggaaatgtcatatcatcaaaggacgctgatgtgaaatctccacttatgccttca
aattttattgaaggcagcagatctggaaatgctagtcaaattgttgctcctatagatgct
tatgggaaaccttctggaaaaccgcttcatttcaagaatatttctggttcatcaacttca
gtcaacttttctgataggctgacggagaatgggggacaaaggccatcagctgcggctgga
aatatagtatcactgccttccatttctagctccctaatgtcatcacaggaaagtttttct
gtcagaaagtctcccaaccacaacatttatccatccaaggaaagttacagtgatctagcc
ccgtcgaggaggctgaactctgaaccaaatttatcaaaacaatttggaaatatcaaagag
atgaccaaggagttggatatgcttctacaatctattgaagaaccaggtggtttcagggat
gcctgcactgttaatcagatagggtccgttgaagaattggagagaggcatagggactcta
tctgacagatgcagaaagtggaagagcattatggatgaacgacttcaagaaattgaacat
cttcttgacataactgtacaagtattggcaaggaaaatatacatggagggcattgtgaag
caagcttctgatagccgatattgggacttctggaattgtcagaagttgagttcagaactt
gagctgaagcggcgacatattttaaaaatgaatcaggatttgactgaccaattaattcaa
ttggaaaggcattttaatggccttgaacttaataaatttggtgaaaatgctggagctcat
gcgggtcgaagagctttgcagagtcaatttgggccttcaagacacattcaatccttgcat
agtttatatagcacaatgacgtctcaattagctgctgctgatcatctttctgagtgcctc
tcgaaacaaatggcagcactgaagatagagtcaccttccgtaaaaaaacagaacgtaaaa
aaagagttgtttgaaacaataggggttccatatgatgcctctttcagttccccttcccta
ggtgctacaaaagttggtggtacgccgaatgagatattatcattttctttgggttctgct
gcttctaaagatcagcccaggagaaatgtgaatgccataaagaattacgaaccagaaact
gcaaggaggaggagagactcactggacaggagctgggaagattatgagcctacaaaagca
actgtgaaaaggttgcttttgcaagaaagtggcaaggaaagcacaagtagatcatccttt
cccattgataagcaacactttagccctcgcctgctggagggatcagccattactggccca
agggatcacataagccctgcaaccttcttgcatccatctgaaaacagagcaggcgttcag
ggtacgcatctgaagcagccttttcagagctcagaaactccatttgttcgggctaatgaa
cttcagggaccattacaacctactgggctgacgtctcctataatgcaagaacacaaaatg
tcatcagcatcccaattgttgcctgcaggttggcaaagttttgcaagggaacctaatatg
acagcagaaaaatttggcaatggcattccatatattgagaagtccgagtcagattcagtg
aaagaaaagtctgtcatgcaatcagacgctagtcagaaaccatccgtttctttggttcct
acacagacaccatcattgctgaagaaaccaaatgatatgctaaattcatttgccaaaggt
acgcttccaaaacaagagagtgtgaaggataggcctttgaccgcaacagttccatctatt
gaagctgggaaaaaactgaatttttcattgtcttcctcgtttgctgttcctgtggccact
agccagcctggaaaggttgaccagcctgatgctgcaacaagcaaaagccagcctggtaaa
attttaccttctcccacattctcaatgtcagtttcgacaccctcatctccagtatttagt
tcatcatcagcacctctatctccgttatcaatttcaccatcagtcatgatgccttcaaac
agatctttggatagttctaacactactgcagatgtgagtaagcctgtatcaacatcgtca
ttgtcttttccctctccaattgtttcttctcctagttttttctcttttgatgcttcaaaa
caactggtgtcctcatcttccccatcacctgtgacaaattcaacatcagaatcttctaaa
acagagatccaaccttctttaaaaacagacaagaatgctaatactatattgccacctcag
gaatgtgggccttccacaattgaaactaatttgaagcttaaaccttcagtatcatctccc
ctcacaattgaaacttcaacaggactggcatctgggagcccggccagttcaaacaatact
gcaggtcctacaaataatgtgagaatgaatgctcagcaagaacagccgtctgccggacat
tctccattcccaacactcccaacttcagggagtgttactggtggaaggactgatgggttt
gatgtacaaaatgcacaggaggatgacatggatgaggaggctccagacacaagcagcaca
actgaacttagtttgggaagccttggtgggtttgggcttggctctgcccctaacccaaca
gctcctaaacctaatccatttggtggatcatttggcaatgcaggaacaaatgtgacttct
cctttctccatgactgtccctagtggagctagtggagagctgtttcggcctgcatctttt
aacatccaatctctacagccttctcaatcatctcagccagcaaattccggtgggtttgct
ggtggctttggcactggtactactgcccaagctcccagtccgagtaagtttggccagcca
gtacaggttggaccagggcagcaagcattagggtcagttcttggtacttttggacagtcg
agacagcttggtactagtctaccaggaaccagttttggatcacccggtggttttggtggt
ggcattacgggaactaatcccactggtggcttctcaagtgctgctactggagggtttgct
ggtgctgcttctgcgggtggcgggtttgccagtttggcttcaggtggtggtgggtttgcc
agtgcaggttcaggtggtggtgggtttgccggtgcaggttcaggtggtggtgggtttgct
ggtgcaggttcaggtggagggggtttcgttggtgcagcttcagctggtagtggttttaca
ggagctgcttctagtggtggacttcctgcggctggtgctggatttgcggcattcggtggt
caacaaggatctggtggtttctctggttttggtagtgcaggaggaactggaaagcctctg
gagttgttcacacagatgaggaagtaa
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integrated database retrieval system
