Prunus mume (Japanese apricot): 103320495
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Entry
103320495 CDS
T03196
Name
(RefSeq) pre-mRNA-processing protein 40A isoform X1
KO
K12821
pre-mRNA-processing factor 40
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103320495
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pmum03041
]
103320495
Spliceosome [BR:
pmum03041
]
Complex A
U1 snRNP components
U1 related factors
103320495
Complex B
103320495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
FF_RHG35_4th
Motif
Other DBs
NCBI-GeneID:
103320495
NCBI-ProteinID:
XP_008220399
LinkDB
All DBs
Position
LG2:complement(10993048..11003981)
Genome browser
AA seq
1031 aa
AA seq
DB search
MANNPQSSAAQPFRPPPVASLGPQSFGSSPSLQYRPVVPTQQGQQFIQSASQQFQPVGQG
IPSSNVGMPASQSQQLQFSQPMQPYPLRPSQPGHATPSSQAVPMQYMQTRPITSAPSQSQ
QPALPFNNQMPGLAGGGMPYSSSYMFAPPSYAQPQNNVSSSSQFQPISQVQAHVSVTGQP
WVSSGNQGAAVPTPVPQSGQHPSSTTFTDSAVNVPSQTQQSSSDWQEHTSGDGRRYYFNR
RTKQSSWEKPLELMTPMERADASTVWKEYTSSDGKKYYYNKVTRESKWTIPEELKLAREQ
AQRELAQGTRSEMNLTSHAPPAVASAETPMGSSSVGPSTSSALPGMVSSPVAVIPVSSFS
NPSPVAPTGSSVASGAQSSITGGVGIQPPVVTVTPLPASVSGSTGVPPTLVSTITKSVST
YENVTSQDIGSADDGAFTQDIEEAKRGMAVAGKVNVTPSEEKTVDEEPLVYANKQEAKNA
FKALLESANVHSDWTWEQTMREIINDKRYGALKTLGERKQAFNEYLGQRKKLENEERRMR
QKKAREEFSKMLEESKELTSATRWSKAVSMFENDERFKAVERARDREDLYESYIVELERK
EKEKAAEEHKQNIAEYRKFLESCDFIKVNSQWRKVQDRLEDDERCLRLEKLDRLLIFQDY
IRDLEKEEEEQKKILKEQLRRVERKNRDEFRKLMEEHVADGTLTAKTHWRDYCMKVKDLS
SYEAVASNTSGSTPKELFEDVAEELEKQYHEDKARIKDAMKLGKVTLASTLAFEEFKVAI
LEDIGFPSISDINFKLVYEELLERAKEKEEKEAKKRQRLGDDFNKLLHTFKEITASSNWE
DCKHLFEETQEYRSIGEENFSREVFEEYITNLQEKAKEKERKREEEKAKKEREREEKEKR
KDKERKEKEREREKEKGKERSKKDETDSENVDVTESHGHKEDKKREKDKDRKHRKRHQSS
MDDVGSDKEEKEESKKRRHSSDRKRSRKHTPESDSESRHRRHKREHQDGSRRNGGYGELE
DGEVGEDGEIQ
NT seq
3096 nt
NT seq
+upstream
nt +downstream
nt
atggctaataaccctcagtcctcagctgcgcagccatttcggcctcctccagttgcttcc
ttgggtcctcaaagttttggttcatccccatctcttcaatatcgaccagtggttccaaca
cagcaaggacaacagtttattcaatcagcctcccaacagtttcagcctgtgggacaaggt
attccttcttcaaatgttgggatgcctgctagtcaaagtcagcaattacaattttctcaa
ccaatgcaaccatatcctctcaggccaagtcagcctggtcatgctacaccttcgtcacag
gctgtgcctatgcaatacatgcagacgaggcctattacatctgccccatcacagtctcag
caacctgccctaccttttaataatcagatgcctggcttagctggtggtggaatgccgtat
tcttcatcatatatgttcgcaccaccttcatatgcccagccacaaaataatgtcagttct
tcgtcccagtttcagccaatctctcaagtgcaagcacatgtatctgtcacaggacagcct
tgggtgtcctctggaaatcagggtgcagcagttcctacaccggtaccgcagtccggtcaa
catccttcaagcactactttcacagattctgctgtaaatgttcctagccaaacacagcag
tcttcttctgattggcaagagcatacatcgggtgatggaagaagatattatttcaacaga
agaacaaaacaatctagttgggagaagcctttagaattgatgacaccgatggagagagcc
gatgcatcaactgtttggaaggaatatacttcttcagatgggaaaaagtattattacaac
aaagttacaagggaatctaagtggacaattccagaggagttaaagttggctcgtgaacag
gctcaaagagaacttgcccagggaacacgttcagaaatgaatttgacttctcatgcccct
cctgctgttgcttcagctgaaacacctatgggatctagttcagttggccccagcacttct
tcagccctacctgggatggtatcgagcccagttgcagttatacctgtgtcttccttttct
aatccttcccccgttgcgcctactggatcatcagttgcttctggtgcacagtcttccata
acaggtggcgttggcattcagcctcctgtggtgactgtcactccactgcctgcttctgtt
tcagggagtactggagttcctcctactttggtcagcaccattacaaaatcagtgagtacc
tatgaaaatgtaacatctcaagatattggaagtgcagatgatggagcttttactcaagat
atcgaggaagcaaaaagaggaatggcagttgctggaaaagtcaatgtgactccgtcagag
gagaaaacagttgatgaagaaccattggtgtatgccaataagcaggaggcaaaaaatgca
tttaaagcacttctggaatctgcaaatgttcactccgattggacttgggagcagacaatg
agagagatcattaatgacaaaagatatggtgctttaaaaactctaggtgagaggaagcaa
gcatttaatgagtacttgggtcaaaggaaaaaactggagaatgaagagaggcgcatgagg
cagaaaaaagctcgggaagaattttcaaaaatgttggaagagtccaaggaacttacgtca
gcaaccagatggagcaaagctgtcagtatgtttgaaaatgatgaacgtttcaaggctgta
gaacgagcgagggaccgggaagatctttatgagagctacattgtagaattggagaggaag
gaaaaagaaaaggcggctgaagagcataagcagaatattgcagagtatagaaaattcctg
gaatcttgtgactttatcaaggtgaacagccagtggcggaaagttcaagatcgcttagag
gatgatgagagatgcttgcgtcttgaaaaacttgacaggttgctcattttccaggactat
attcgtgaccttgagaaggaagaagaggagcaaaagaagatactgaaggaacaattgagg
cgggttgagaggaaaaaccgcgatgagtttcgaaagctgatggaagaacatgttgccgac
ggtactcttacagctaaaactcactggcgcgattactgcatgaaggttaaagacctgtct
tcatatgaagctgttgcatctaacacctctggttcaacaccaaaagaattgtttgaggat
gttgctgaagaattagagaaacaatatcatgaagataaagctcggataaaggatgcaatg
aagttggggaaggttaccctggcttctacactggcatttgaagaatttaaggttgctatt
ttggaagatattggtttcccatcaatatcagacattaactttaagcttgtatatgaggaa
ttattagagagagccaaggagaaggaggagaaagaagcaaagaagcgtcaacgactaggt
gatgacttcaataagctattgcacacattcaaggaaataaccgcttcttctaattgggaa
gattgcaaacacctttttgaagaaacccaagaatacagatcaattggggaagagaacttt
agtagggaagtttttgaggaatatattacaaacttacaggagaaggctaaagagaaagaa
cgcaagcgagaggaggaaaaggctaaaaaagagagagagagagaggagaaagagaagcgt
aaggataaagagagaaaggagaaggagagagaacgtgaaaaagagaagggaaaagaacgg
tctaagaaggatgaaacagatagtgaaaatgtagacgtaactgagagtcatggtcataaa
gaagataagaaaagggagaaagacaaagatagaaagcaccggaagcggcatcaaagttcc
atggatgatgtaggttctgataaggaggagaaagaagagtctaagaaacgcagacatagt
agcgaccgcaaaagatcaagaaaacatacacctgaatctgacagtgaaagtcggcataga
agacacaagagagagcatcaggatggttcccgtcgaaatggtggatatggggaacttgaa
gatggggaggttggtgaagatggggaaattcagtag
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integrated database retrieval system
