KEGG   Prunus mume (Japanese apricot): 103320553
Entry
103320553         CDS       T03196                                 
Name
(RefSeq) glycine dehydrogenase (decarboxylating), mitochondrial
  KO
K00281  glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
Organism
pmum  Prunus mume (Japanese apricot)
Pathway
pmum00260  Glycine, serine and threonine metabolism
pmum00630  Glyoxylate and dicarboxylate metabolism
pmum00670  One carbon pool by folate
pmum00785  Lipoic acid metabolism
pmum01100  Metabolic pathways
pmum01110  Biosynthesis of secondary metabolites
pmum01200  Carbon metabolism
Module
pmum_M00532  Photorespiration
pmum_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:pmum00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    103320553
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    103320553
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    103320553
   00670 One carbon pool by folate
    103320553
Enzymes [BR:pmum01000]
 1. Oxidoreductases
  1.4  Acting on the CH-NH2 group of donors
   1.4.4  With a disulfide as acceptor
    1.4.4.2  glycine dehydrogenase (aminomethyl-transferring)
     103320553
SSDB
Motif
Pfam: GDC-P GcvP2_C Aminotran_5 Beta_elim_lyase Cys_Met_Meta_PP
Other DBs
NCBI-GeneID: 103320553
NCBI-ProteinID: XP_008220472
LinkDB
Position
LG2:complement(11366828..11372206)
AA seq 1054 aa
MERARRLANRAFVKRLVSDAKQFRQNETVFSSSTSPVLYTPSRYVSSLSPCSFMRTSSRS
DSLAGKNVSHNVGYRTGTQTRSISVDALKNSDTFPRRHNSATPDEQTKMAELCGFGSLDS
LIDATVPKSIRLESMKFTKFDEGLTESQMLEHMQYLASKNKIFKSFIGMGYYNTYVPPVI
LRNIMENPAWYTQYTPYQAEISQGRLESLLNFQTLITDLTGLPMSNASLLDEGTAAAEAM
AMCNNIQKGKKKTFVIANNCHPQTIDICKTRADGFDLKVVTADLKDIDYKSGDVCGVLVQ
YPGTEGEVLDYGEFIKNAHANGVKVVMATDLLALTLLKPPGEFGADIVVGSAQRFGVPMG
YGGPHAAFLATSQEYKRMMPGRIIGVSVDSSGKPALRMAMQTREQHIRRDKATSNICTAQ
ALLANMAAMYAVYHGPEGLKTISQRVHGLAGAFAVGLKKLGTVEVQGLPFFDTVKVKTSD
AHAIADAAIKHGINLRVVDTNTITASFDETTTLEDVDKLFKVFALGKPVPFTAASLAPEV
QPAIPSGLTRESPYLTHPIFNSYHTEHELLRYIHKLQSKDLSLCHSMIPLGSCTMKLNAT
TEMMPVTWPSFTDIHPFAPAEQAAGYQEMFEDLGDLLCTLTGFDSFSLQPNAGAAGEYAG
LMVIRAYHFVRGDHHRNVCIIPVSAHGTNPASAAMCGMKIVPVGTDAKGNINIEELRKAA
EANKDNLSALMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGWIGA
DVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVPTGGLPAPDKSQPLGTISA
APWGSALILPISYTYIAMMGSKGLTDASKIAILNANYMAKRLEDYYPILFRGVNGTVAHE
FIVDLRGFKHTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKAELDRFCDA
LISIREEIAEIEKGKADLHNNVLKGAPHPPSLLMGDTWTKPYSREYAAFPASWLRSAKFW
PTTGRVDNVYGDRNLICTLQPASQAVEEQAAATA
NT seq 3165 nt   +upstreamnt  +downstreamnt
atggaacgtgcaaggcggctggctaaccgggccttcgtgaagcgcttggtttcagatgcc
aagcagtttcgccagaatgagactgtgttcagctcttcaacatcccctgtcttgtacacg
ccttcaaggtacgtttcttcattgtctccatgctctttcatgcgcacaagtagcagatca
gattcattagcaggcaaaaatgtgtcacataatgttggttatcgcactgggacacaaaca
aggtcgatttctgttgatgcattgaaaaacagtgacacttttcctcgccgccataactca
gccaccccagatgaacaaaccaaaatggctgagttatgtgggtttggtagtcttgattca
cttatcgatgccaccgtgcccaaatcgattcgactcgaatcgatgaagtttaccaagttt
gatgaagggttaactgaaagccaaatgcttgagcatatgcagtatttggcttccaagaat
aagattttcaagtcttttattgggatggggtattataacacttatgtccctcctgtgatt
ttgaggaacataatggaaaacccagcttggtatacccagtacactccttaccaggctgag
atttcccaagggaggcttgagtctttgctcaatttccagaccctgatcactgacctcact
ggccttcccatgtcaaatgcttcattgcttgatgaaggaaccgccgctgccgaggcaatg
gcgatgtgtaacaacattcaaaaagggaagaagaagacctttgttattgctaacaactgc
cacccccagaccattgatatttgtaagactagagcagatggttttgatcttaaagttgtg
actgcggatcttaaggatattgattacaaatcgggtgatgtttgtggtgttcttgttcag
tatccggggactgagggtgaggttttggattatggggagtttattaagaatgctcatgct
aatggggttaaggttgtgatggcaactgatctcttagcattgacactgttgaagcctcct
ggtgaatttggggcagatattgttgttggctctgcacagaggtttggtgttccaatgggt
tatggaggtcctcatgcagcattcctggccacctcccaagagtacaagaggatgatgccg
ggaagaattattggtgttagtgttgattcttcagggaagcctgcgctgcgtatggcgatg
cagacaagggagcaacatatcaggagggacaaggctaccagcaacatttgcactgctcag
gcactacttgcaaacatggctgccatgtatgctgtttatcatggacctgaaggccttaaa
accatatcccaaagggttcatggtcttgctggggcatttgcagttggattgaagaaactt
gggacagtggaagttcagggccttcccttctttgacactgtgaaggttaagacttctgat
gcacatgccattgctgatgctgcaatcaagcatggaataaatttgcgagtagtagacacg
aacactattactgcttcgttcgatgaaacaactaccttggaggatgttgataagcttttc
aaagtttttgctttgggcaagcctgttcctttcactgctgcatctcttgcaccagaagtt
cagcctgcaattccttctgggctaactagggagagcccatatcttacccatccaatcttc
aactcgtatcatacggagcacgagttgctcagatacattcataagttgcaatcaaaggat
ctctcgctatgccacagtatgattccattgggatcttgcacaatgaaattgaacgcaaca
actgaaatgatgccagtgacatggcctagttttactgacattcaccctttcgcccctgca
gaacaggctgcgggttatcaggaaatgttcgaagatttgggtgacctattgtgtaccctc
actgggtttgactctttttcgttgcaacctaatgctggagctgctggagagtatgctggg
ctgatggttattcgggcatatcattttgtaagaggggatcaccaccgcaatgtgtgcatt
atacctgtttcggcacacggtaccaatcctgctagtgctgcaatgtgtggaatgaaaatt
gtccctgttggaactgatgcgaagggaaacatcaacattgaagagctgaggaaggctgct
gaagcaaacaaggataacctatcagctcttatggtgacatatccgtcaactcatggagtg
tatgaagaaggtatcgatgagatatgtaagataatccatgataatggaggtcaagtatac
atggatggggctaacatgaatgcacaggttggtctgacaagcccaggttggattggagct
gatgtttgccatctcaatctccacaaaacattttgcattccacatggaggtggtggtcct
ggcatgggtcctattggtgtgaagaaacacttggcgccattcttgccgtctcatcctgtg
gtacctaccggtggcttacctgctccagacaagtctcagccacttggtaccatctctgca
gcaccttggggttctgcacttattttgcccatatcttatacttacatagccatgatgggg
tccaaggggctcaccgatgcatcaaagatagcaattctaaacgcaaactacatggccaaa
cgcttggaggattattaccccattctattccgtggtgtcaatggaactgttgcccacgaa
ttcattgttgacttgagaggctttaagcatactgctgggatagagcctgaagatgttgct
aagcgtcttatggactacggattccatggaccaacaatgtcatggccagttcctggtact
ctcatgatcgaaccaacagaaagtgaaagcaaggctgagttagacaggttttgcgatgct
cttatttccattagagaagagattgctgagattgagaaaggaaaagctgatctccacaac
aatgtcctcaagggagctcctcacccaccatctctgcttatgggagatacatggactaag
ccatattcccgggaatacgcagccttccccgcttcgtggctccgttcagcaaagttctgg
cctactactggacgtgttgacaatgtgtatggtgatcgcaacctcatctgcacccttcaa
ccggcatcacaggcggtggaagaacaagcggcagccactgcttag

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