Prunus mume (Japanese apricot): 103320600
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Entry
103320600 CDS
T03196
Name
(RefSeq) probable 28S rRNA (cytosine-C(5))-methyltransferase
KO
K15264
25S rRNA (cytosine2278-C5)-methyltransferase [EC:
2.1.1.311
]
Organism
pmum
Prunus mume (Japanese apricot)
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pmum03009
]
103320600
Enzymes [BR:
pmum01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.311 25S rRNA (cytosine2278-C5)-methyltransferase
103320600
Ribosome biogenesis [BR:
pmum03009
]
Eukaryotic type
Other ribosome biogenesis factors
103320600
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
NSUN5_N
NSUN5_fdxn-like
Methyltransf_25
Methyltransf_31
RrnaAD
PCMT
Ubie_methyltran
FtsJ
Methyltransf_4
RsmF-B_ferredox
Cons_hypoth95
ASPP2-like_RA
TRM
CO4A-B_CUB_C
RASSF8-10_RA
Motif
Other DBs
NCBI-GeneID:
103320600
NCBI-ProteinID:
XP_008220530
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All DBs
Position
LG2:11613177..11616729
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AA seq
500 aa
AA seq
DB search
MARRKHRATPPSAPAEKSDNRRHLSMERSAYFARREAAKVLKLVLQGDAKRQSVGSIKTL
VYGPSVRNKKGTFALICQTLKYLSIIQDVLKAADVLNSKWKKQDELVYIVTYDILFGQVS
SSAVGDAEKFLMRRKEALQAALARLLVKKKVKSVEELIALYDIPDISNPRYVRVNTLKMD
VETAVLELQKQFKVHKDDLVPDLLVLPPCSDLHDHHLIKNGNVFMQGKASSMVAAALAPK
PEWEVLDACSAPGNKTVHLAALMRGKGKVIACELNEERVKRLKETIRLSGASNIKVVHGD
FLDLNPEDPPYSKVRAILLDPSCSGSGTASARLDHLLPSSAPGQAADFTSTERLNKLAAF
QRKALAHALSFPEVERVVYSTCSVDQVENEDVVKSVLPLAASNGFQLETPFPEWHRRGLP
VVEGAECLLRTDPKEDKEGFFIALFVRRSSGNQSEKPNADGHTHRASTAKRSYVGAHLNL
FKMFAHAHLSRRNCSHCDCC
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgccgaaagcacagagcgaccccgccttctgcacccgccgagaaatcggataac
cgacgtcacttaagcatggagaggtcggcttacttcgctaggagagaggcggcgaaggta
ttgaagctcgttctccaaggagacgccaagcgccagtccgtcggctctattaagacgctc
gtttacggtccctcagtgaggaacaagaaaggcacgtttgctttgatctgccaaacccta
aagtatctttcgataatccaagacgtgttgaaggccgccgacgtattgaacagcaagtgg
aagaagcaagacgagttagtatacatagtcacctatgatattctttttggccaggtgagt
tcatcagcagtcggggatgcggagaagtttctcatgcgtcgcaaagaggctctgcaggca
gctctagcgcggcttttagtgaagaaaaaagtgaagagtgtggaagagttgatagctctt
tatgatatacctgatatttcaaatcctcgttatgttcgtgtaaatactctgaaaatggat
gttgagactgccgtccttgaattacagaagcaattcaaggttcataaggatgacctggtt
cccgacttgttggttcttccaccgtgtagtgatctccatgatcatcatctaataaagaat
ggaaatgtctttatgcaaggaaaggcaagctctatggtggcagcagcccttgctccaaaa
ccagaatgggaggttctcgatgcatgctcagctcctggaaacaaaactgtacaccttgca
gctcttatgagaggaaagggaaaggtcatagcttgtgagctgaatgaagaaagggttaaa
cgtttaaaagagactatcagactctctggtgcttctaatattaaggttgtgcatggagat
ttcttagacttaaaccctgaagatcctccatattccaaggtgcgcgccattctcttagat
ccttcctgctctggatctgggactgcttctgcaagattagatcatttgctcccatcttct
gctccaggtcaagctgctgattttaccagcacagaaagactgaacaagcttgcggccttc
cagagaaaagctctagctcacgctttatcttttccggaagttgagagagttgtttacagc
acatgctctgtcgaccaagttgaaaatgaagatgttgttaaatctgttctaccacttgct
gcatccaatggttttcaactggaaactcccttcccagaatggcaccgccgtggtctcccg
gttgtcgagggcgctgaatgcttgcttcggactgatcccaaggaggacaaagaaggcttc
ttcattgctctgtttgtcaggaggagctctgggaatcagtcagagaaacctaacgccgac
ggacacactcacagagcttcgacggcaaagagaagttatgtgggagctcatctcaatctg
tttaaaatgtttgcacatgcgcatttgagtcggcgtaattgtagtcattgcgattgttgt
taa
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