KEGG   Prunus mume (Japanese apricot): 103320736
Entry
103320736         CDS       T03196                                 
Name
(RefSeq) DNA-directed RNA polymerases IV and V subunit 2-like
  KO
K16252  DNA-directed RNA polymerase IV and V subunit 2 [EC:2.7.7.6]
Organism
pmum  Prunus mume (Japanese apricot)
Pathway
pmum03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:pmum00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    103320736
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pmum03021]
    103320736
Enzymes [BR:pmum01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     103320736
Transcription machinery [BR:pmum03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol IV and V specific subunits
     103320736
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_7 RNA_pol_Rpb2_4 RNA_pol_Rpb2_3 RNA_pol_Rpb2_2 RNA_pol_Rpb2_5
Other DBs
NCBI-GeneID: 103320736
NCBI-ProteinID: XP_008220676
UniProt: A0ABM0N7J6
LinkDB
Position
LG2:complement(12391467..12398772)
AA seq 1200 aa
MGASSDAKGDIGMSSKGESFSDIADMDIDDNGYDDDYDYSTSIHDLGEGFLKIFCKEAAI
AFFNEYGLISHQINSYNDFIKNGIQRVFDSFGEIIVEPGYDPSKKGESEWRYASVKFGKV
TLGMPSFWGGSDDEKEYKMLPRHARLQNMSYASKMKVNITVEVYTQKLVSSDKFKTGKAQ
YLDKQILSTDTRDIIIGSVPVMVKSDLCWMKDFEKGDCDFDHGGYFIIKGAEKTFIAQEQ
SCLKRLLITNNQGLTVAYRSEVKRHRLIIRLVGISKLENIEGVEKVLTVYFMSTEIPVWI
WFFALGVSSDREVMNLIDYDSEDASISNILFASIRDADKLNDKVDGGFRRGKNALKYVDE
VIRKTAFPPGESMEECISLYLFPNLKGLKQKARFLGYMVKSLLQAYAGRRKCDNRDDFRN
KRLDLAGELLERELKAHIGHARRRMAKALQRDLYGDRAVRPIEHYLDASIVTNGISRAFS
TGAWCHPFKRMERMSGVVATVGRANPLQTMVDMRKTRQQVQYTGKVGDARYPHPSHWGKV
CFLSTPDGENCGLVKNLATTGLVSTNVLESLIPQLLTCGMEKLVDDTFTSLRGKDKVFLN
GDWVGVCEDSLSFVLELRRMRRRKKLPHQVEIKRDVHQGEVRIFSDAGRILRPLLVVENL
NKVKSSKGGKSSFQYFLDNGIIELIGAEEEEDCSTAWGIKYLFMEDKGKSAAKFTHCELD
MSFLLGLSCGIIPYANHDHARRVLYQAQKHSQQAIGFSTTNPNLRVDTLSHQLHYPQRPL
FQTMTSDCLGKPGRHNRIVPKPEYYNGQNAIVAVNVHLGFNQEDSIVMNRASLERGMFRS
EHIRSYKAEVDNKESLDKRRKPDDCVNFGKMQSKFGRVDSLDDDGFPYVGANLQSGDIII
GRCSESGADHSIKLKHTERGMVQKVLLSSNDDGKNFAVVSLRQVRSPCLGDKFSSMHGQK
GVLGFLESQENFPFTIQGVVPDIVINPHAFPSRQTPGQLLEAALGKGIACGGSKRYATPF
STLSVDDITDQLHSAGFSRWGNERVYNGATGAMVRSLIFMGPTFYQRLIHMSEDKVKFRN
TGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDSSQMHVCQKCK
NVAYVILRTVAGGRKIRGPHCRICDSADDLVRVNVPYGAKLLCQELFSMGISLKFETRFC
NT seq 3603 nt   +upstreamnt  +downstreamnt
atgggggcgtcatcggatgccaagggagatattggtatgagcagcaagggagaaagcttt
tcagatatagctgacatggatattgatgataatggatatgatgatgattacgattattcg
actagcatacatgacctgggggaagggtttctgaagattttttgtaaggaagctgcaata
gctttcttcaacgagtatggcctcattagtcatcaaatcaactcatacaatgacttcata
aaaaatggtatacaaagggtctttgattcttttggtgagattatagttgagcctgggtat
gacccatcaaagaagggagagagtgagtggcgatatgcttctgtgaagtttggcaaggtt
acccttggtatgccaagcttttggggtggttcagatgatgaaaaggagtataaaatgtta
cctaggcatgctcggcttcaaaacatgtcatacgcatccaagatgaaagtgaacattact
gttgaggtatatactcaaaagcttgtgagtagtgataagtttaagactggaaaagcacag
tatcttgataagcaaattctgagtacagacaccagagacattataattggtagtgtccct
gtgatggtgaagtctgacttgtgctggatgaaggacttcgagaaaggagactgtgatttt
gaccatggaggctatttcataatcaagggtgcagagaagacatttattgcacaagaacag
agctgtctgaagagacttcttatcacaaataatcagggattgacagtagcatacaggtca
gaggttaagaggcataggctaataattaggctagtcgggatttccaaattagaaaacatt
gaaggagtagagaaagtccttactgtttacttcatgtcgacggaaatccctgtgtggata
tggttttttgcccttggtgtttcatcagacagagaggtgatgaatctgattgattatgac
agtgaagatgccagcatctcgaacatactctttgcctctattcgcgatgcagataaatta
aatgataaagtagatggggggttccgtagggggaagaatgccctcaaatatgtggatgag
gtgataaggaaaactgcatttcctcctggggaaagtatggaagaatgcattagcctgtat
ctgttccccaatctgaaaggcctaaagcaaaaggctcgctttcttgggtatatggtaaag
tctctattacaggcctatgctggccgcaggaaatgtgacaatagggatgactttaggaac
aagaggttggacttggctggtgagcttctagagcgagagctcaaggcacatattggacat
gcacggaggcgcatggcaaaggccttgcagagagacctttatggtgatcgtgctgtgcgg
ccgatagagcactatctagatgcttctatagtgactaatggtatttctagagcattctca
actggagcgtggtgtcatcccttcaagaggatggagaggatgtctggtgtagttgcaaca
gttgggcgagcaaatccgctgcagacaatggtggatatgaggaagacaaggcagcaggtt
caatatacagggaaggttggagatgccagatacccgcatccttctcactggggtaaggtt
tgctttctctcaaccccggatggtgagaattgtggacttgtaaaaaatttggctaccact
ggactagttagtacaaatgtactggaatctctgataccccaattattaacatgtggcatg
gagaaattggtggatgatacttttacatcactgcgtgggaaggataaagtttttctgaat
ggagactgggttggagtttgtgaagattccctctcatttgttttggaactaaggaggatg
cgtcgcaggaaaaagttgccacatcaggtcgaaatcaagagagatgtacaccaaggagaa
gtacgcatattttctgatgctggaaggatcctacgccctctcttggtagttgagaatttg
aacaaggttaaatcatccaaaggggggaaaagttccttccaatattttcttgacaatgga
ataatcgagctcattggagcagaagaagaagaagactgctctactgcgtggggtattaag
tatcttttcatggaagacaagggaaaatcagccgcgaagttcacacactgtgaacttgac
atgtcatttttattaggtttaagctgtggcattatcccatatgcaaatcacgaccacgca
cggagggtcctataccaagcccagaagcactctcaacaagctattggtttttctaccacc
aatcctaacctcagagtggatactctgtctcaccaactgcactacccccagaggccactc
ttccagacaatgacatctgattgtcttggaaaaccaggacgccataacagaattgttcca
aagcctgaatactataatggccagaacgctattgtggcagtcaatgtccacttaggattt
aaccaagaggatagcatagtaatgaaccgggcatcattggaacgtggtatgttccgatct
gaacacataagaagttacaaggctgaggttgacaacaaggagtctctggacaagaggcgg
aagcctgatgattgtgtcaattttggaaagatgcaaagtaaatttggacgtgttgacagc
ctcgatgatgatggttttccatatgttggtgcaaatttgcagagtggtgatattataatt
gggaggtgcagtgaatcaggagctgatcatagcatcaaactgaagcacactgaaagggga
atggttcagaaagttctactttcttctaatgatgatggaaagaattttgctgttgtgtct
ctaagacaggttcgttctccatgccttggagacaagttctcaagcatgcatggacaaaaa
ggcgtcctggggtttctggagtcccaagagaacttccctttcacaatacagggggtggtt
ccagatattgtaattaatccacatgcatttccttcacgacaaactcctggtcaactccta
gaggctgctttggggaagggaattgcctgtggtggttcaaagagatatgcaacgcctttc
tctacgctctctgttgatgacatcacagaccaactgcatagcgctggattttcaagatgg
ggaaatgagagagtatacaatggtgcaactggtgcaatggttcgttccctgatatttatg
ggcccaacattttaccagcgcttgattcacatgtctgaagataaagttaagtttcggaac
actgggccagtccatcctttgaccagacagccagtggcagatcggaagcgatttggtggg
atcaagtttggtgagatggaacgtgactgccttatagcccatggagcttcagcaaattta
catgaacgcctcttcactcttagtgactcctcccaaatgcatgtttgccagaaatgcaaa
aatgtggcttatgtgatcctacgaacagtcgctggtggccgtaagatcaggggtcctcat
tgccggatttgcgactctgctgatgaccttgttcgggttaatgtaccatatggagcgaag
ctattgtgccaggagcttttcagcatgggcataagcttaaagttcgagacccggttttgt
tga

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