Prunus mume (Japanese apricot): 103320759
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Entry
103320759 CDS
T03196
Name
(RefSeq) E3 ubiquitin-protein ligase CIP8-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
pmum
Prunus mume (Japanese apricot)
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmum04131
]
103320759
04121 Ubiquitin system [BR:
pmum04121
]
103320759
Enzymes [BR:
pmum01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
103320759
Membrane trafficking [BR:
pmum04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
103320759
Ubiquitin system [BR:
pmum04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
103320759
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-C3HC4_3
zf-ANAPC11
zf-RING_10
zf-HC5HC2H
DUF3915
zf-Nse
zf-RING_5
Apis_Csd
zf-HC5HC2H_2
Atrophin-1
Zn_ribbon_PF0610
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
103320759
NCBI-ProteinID:
XP_008220737
LinkDB
All DBs
Position
LG1:459211..461544
Genome browser
AA seq
370 aa
AA seq
DB search
MEEVRYWCHACSQMVDPIMEVEMKCPICQSGFIEEMNSNTRDNHEADSDFGSDRALSLWA
PILLGMMNNPHRRRRLRRLDFDEDEDDDNDDGEARHGGDTELDRELESIIRRRRRNSATI
LQLLQGIRAGSASESENSESDRDRDRDRERERERERERVILINPFSQTIIVQGSYDSNHG
QNNNHTPMGSLGDYFIGPGLDLLLQHLAENDPNRYGTPPAQKEAVEALPTVTIKENLQCS
VCLDDFEAGVEAKEMPCKHKFHSGCILPWLELHSSCPVCRFQLPADESKRDSDNSRNSSD
QRESENIGGDGGGVEGDGDGRNGSGRRFSIPWPFNGLFSNSGSQSSGSGGNSSSAANATG
SGSASQTDEN
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagtaaggtattggtgtcacgcgtgttctcaaatggtggatcccatcatggaa
gtagaaatgaaatgcccaatttgccaaagcggatttattgaagaaatgaatagcaacacg
agggacaatcatgaagctgactctgattttggatcagatcgagccctctccctctgggca
ccaatcttgctgggaatgatgaacaatccccatcgacgccgaagattaagacgactagac
tttgatgaggatgaggatgatgataatgatgatggcgaggcccgccatggcggagacact
gaattggacagggaacttgaatcaatcatccgaaggaggaggagaaactcggctactatt
ctacagctgcttcaaggcattcgggctggctcggcatctgagtctgagaattctgagagt
gatagggatagggatagggatagagagagagaaagggaaagggaaagggaacgagtaatt
ctgatcaatcctttcagtcaaaccatcattgttcagggttcttacgattcgaatcatggc
caaaacaacaatcacacccctatgggttcattaggcgattattttattgggcctggttta
gatttattgctgcaacatttggcagagaatgatcctaacagatatgggactccgccagcg
caaaaggaggcagtggaagctctgcccactgtgacaatcaaggagaatctgcagtgttca
gtgtgcttggatgattttgaggctggtgtagaagcaaaagagatgccatgtaagcataaa
tttcatagcgggtgtattctgccatggctggagcttcatagttcctgtccagtatgcagg
tttcagttgcctgctgatgaatccaaacgcgattctgataattctcggaacagcagtgac
caaagggagagtgaaaacataggtggtgatggtggtggggtggagggagatggggatggg
agaaacggaagcggaagaaggttttcaattccatggcctttcaatggtctgttttctaac
tcaggatctcaatctagtggcagtgggggtaattcttcctcagcagcaaatgcaactgga
agtggaagcgcttctcaaacagatgagaattga
DBGET
integrated database retrieval system
