Prunus mume (Japanese apricot): 103320878
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Entry
103320878 CDS
T03196
Name
(RefSeq) probable pyridoxal 5'-phosphate synthase subunit PDX1
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum00750
Vitamin B6 metabolism
pmum01100
Metabolic pathways
pmum01240
Biosynthesis of cofactors
Module
pmum_M00916
Pyridoxal phosphate biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
103320878
Enzymes [BR:
pmum01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
103320878
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GFIT
Motif
Pfam:
SOR_SNZ
ThiG
Dus
TetR_C_27
Motif
Other DBs
NCBI-GeneID:
103320878
NCBI-ProteinID:
XP_008220846
UniProt:
A0ABM0N7Z8
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Position
LG1:3510275..3511834
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AA seq
312 aa
AA seq
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MADSSGVVTVYGKGAIYETTTKSSPFSVKVGLAQMLRGGVIMDVVNPAQARIAEEAGACA
VMALERVPADIRSQGGVARMSDPQLIKEIKRSVTIPVMAKARIGHFVEAQILEAIGVDYV
DESEVLTLADDEHHINKHNFRVPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIVEAV
RHVRQVMGDIRVLRNMDDDEVFAYAKRIAAPYDLMMQTKQLGRLPVVQFAAGGVATPADA
ALMMQLGCDGVFVGSGVFKSGDPARRARAIVQASTHYSDPDVLAEISCGLGEAMVGINLN
DEKVERYAFRSD
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atggctgacagcagtggcgttgtcaccgtatacggcaaaggcgccatatacgaaaccacg
accaaatcctccccattctccgtcaaagttggcctcgcccaaatgctccgcggcggcgtc
atcatggacgtcgtcaaccccgcacaggcccgcatcgccgaggaggccggcgcatgcgcc
gtcatggcccttgagcgcgtccccgccgacatccgatctcagggcggcgttgcccgaatg
tccgacccgcagcttatcaaggagatcaagcgctccgtcaccatccccgtcatggccaaa
gctcgcatcggccacttcgtcgaggcccaaatcctcgaggccatcggcgtcgactacgtg
gacgagagcgaggtcctgaccctcgccgacgacgagcaccacatcaacaagcacaacttc
cgcgtcccgttcgtctgcggctgcaggaacctcggcgaggcgcttcgccggatccgggag
ggtgccgcgatgatccggacgaagggggaggccggcaccggaaacatcgtcgaggccgtg
aggcacgtgcggcaagtgatgggggacatcagggttttgcggaacatggacgacgacgag
gtgttcgcatacgcgaagagaatcgcggcgccgtacgatctcatgatgcagacgaagcag
ctcgggaggctgccggtggtgcagttcgccgccggtggcgtggcaacgcctgccgacgcg
gcgttgatgatgcagttggggtgcgatggggttttcgtcgggtcgggtgtgtttaagagt
ggtgacccggcccggagggctcgggctattgtgcaggcttcgacccattatagtgaccca
gatgtgctggctgagatcagctgtggattgggtgaggccatggttgggattaatctgaat
gacgagaaggttgagaggtacgcgtttcggtctgactga
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