Prunus mume (Japanese apricot): 103320994
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Entry
103320994 CDS
T03196
Name
(RefSeq) protein SHOOT GRAVITROPISM 5
KO
K25871
zinc finger protein IDD14/15/16
Organism
pmum
Prunus mume (Japanese apricot)
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmum03000
]
103320994
Transcription factors [BR:
pmum03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
103320994
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
C2CH-4th_BIRD-IDD
zf-C2H2
zf-C2H2_6
End_N_terminal
zf-met
zf-C2H2_4
zf-H2C2_2
V-ATPase_G_2
Motif
Other DBs
NCBI-GeneID:
103320994
NCBI-ProteinID:
XP_008220958
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Position
LG2:13740530..13743737
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AA seq
465 aa
AA seq
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MLDNHTASSSAAPSSSSHDALENGGATHKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVC
EICNQGFQRDQNLQMHRRRHKVPWKLLKREIAQDQVIKKRVFVCPEPSCLHHDPCHALGD
LVGIKKHFRRKHSNHKQWVCDKCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFI
EHQDTCTVRHVVRPEFQAALQPACSSRTASSTSPSSDTNFSINNNNNNNLPQVLPGFPLR
PNPTHHHDHQREHALNNPHSSCNQQQQQQVQNNILELQLLPSSNTRTTSPPNLDEKHATH
LKLSIGSSSCDQRGDGKNDQTSQPSSSVIRRSSSNAEKMDGAGLTLEVARLKEFASEELK
LAMAEKAYAEDARREAKRQIEMAELEFTNAKRMRQQALAELEKAQFLKEQAMKKISSAIL
QITCQACKQHFHASATTAVGPSDETSLAMSYMSSATTEGEGDHDQ
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgttggacaaccacactgcttcttcctctgctgctccatcttcttcctctcatgatgcc
ttagaaaatggaggagccactcacaaaagaaaaagaagaccagcaggcacaccagatccg
gatgcagaagttgtgtctctgtctcccaagaccttgctggaatcagaccggtacgtatgc
gagatctgcaaccaaggatttcagagagatcagaacctgcagatgcacaggcgacggcac
aaggtgccgtggaaattactaaagagagaaattgctcaagatcaggtcatcaagaaaagg
gtgtttgtctgcccggagcccagctgtctgcaccatgacccttgccacgccctgggcgat
cttgttgggattaagaagcacttcagaagaaaacacagcaatcacaagcagtgggtgtgc
gacaagtgctccaaaggctatgcggttcaatctgattacaaagcccatctcaaaacctgt
ggcaccagaggacattcttgtgactgtggccgtgtgttttccagagtggaaagtttcata
gagcaccaagacacttgcacagtccgacacgtcgtccggccagaattccaggcggcactg
cagccggcctgctcttctcgaaccgcatcgagcaccagcccctccagcgacaccaatttc
agcatcaacaacaacaataataataatttgccacaagtcttgcctggtttcccattgcgg
ccaaacccaactcaccatcacgatcatcagcgtgagcatgctcttaataatcctcacagt
tcttgtaaccagcagcagcagcaacaagtccagaataatattctggaacttcagctcctt
ccatcctccaatacccgcactacctccccaccaaatttagacgaaaaacacgcaacccat
ttgaagctttccattggctcatcgtcatgtgatcagcgcggtgatggaaagaacgatcaa
acaagccagcccagttcatcagttatacgaagaagctcttcaaatgctgagaagatggac
ggtgctgggctcacgttggaagtggcaaggttgaaagagtttgcgagcgaggagttaaag
ctggccatggctgaaaaggcgtacgccgaagacgctaggcgagaagccaaacggcaaata
gagatggctgagctggagtttaccaacgccaagagaatgaggcaacaagccctggcggaa
ctggagaaggctcagttcctcaaagagcaggccatgaagaaaataagctccgccattttg
caaatcacttgtcaagcttgcaagcaacactttcatgcttctgcaaccaccgccgtgggg
ccctctgatgagacctctcttgccatgagttacatgtcctccgccacaaccgaaggagaa
ggagatcacgatcaatga
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