Prunus mume (Japanese apricot): 103321016
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Entry
103321016 CDS
T03196
Name
(RefSeq) protein CHROMATIN REMODELING 19
KO
K14439
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
pmum
Prunus mume (Japanese apricot)
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pmum03036
]
103321016
Chromosome and associated proteins [BR:
pmum03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
103321016
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
ERCC3_RAD25_C
SWI2_SNF2
Motif
Other DBs
NCBI-GeneID:
103321016
NCBI-ProteinID:
XP_008220981
LinkDB
All DBs
Position
LG2:complement(13922735..13927771)
Genome browser
AA seq
739 aa
AA seq
DB search
MKRGLDDFEISDDDWEEHSSSFKPSRVLKKPRTPTPPPIESFAFRASSPKPQQLSDDDDD
CVEIKNELEDDDVDEVQVIRPVKPGRRFVIEDEESDGDWVNIESTSEEEEEEEEEEEEAE
ELEEDDVVGKALQKCAKISADLRRELHGSSAPAVSDRYAEVEAASVRIVTQDDIIAACRS
DHSDFQPILKPYQLVGVNFLLLLYRKGISGAILADEMGLGKTIQAITYLMLLKHLHNDQG
PHLIVCPASVLENWERELKKWCPSFSVLQYHGAARSAYSKELSSLAKAGLPPPFNVILVC
YSLFERHSGQQKDDRKILKRWQWSCVLMDEAHALKDKNSYRWKNLMSVARSANQRLMLTG
TPLQNDLHELWSMLEFMMPDLFTTEDVDLKKLLSAEDRDLIGRMKSILGPFILRRLKSDV
MQQLVPKIQRVEYVVMEKEQADAYKEAIEEYRAASQARIAKTSEVNSNSILGVLPRRQIS
NYFVQFRKIANHPLLVRRIYSDEDVVRFARKLHPMGAFGFECTLDKVIGELNSYSDFSIH
RLLLYHGVTDKKGFLPDKYVMLAAKSQALAELLPSLKQAGHRVLIFSQWTSMLDILEWTL
DVIGVTYRRLDGSTQVTERQTIVDTFNSDTSIFACLLSTRAGGQGLNLTGADTVVIHDMD
FNPQIDRQAEDRCHRIGQVKPVTIYRLVTKGTVDENVYEIAKRKLVLDAAVLESGLEMDN
EGETSEKTMGEILSKLLLG
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgcggtctcgacgatttcgaaatctccgacgacgactgggaggagcattcctcc
tccttcaagccctctcgagtcctcaagaaacctcgaaccccaacgccgcctccaattgag
tccttcgccttccgagcgtcctcccccaagccccaacaactctccgacgacgatgatgat
tgcgtcgaaattaaaaatgagttggaggacgacgacgtcgacgaggttcaggttatcagg
cccgtcaaacctggccgtcggttcgtcatcgaggacgaggagagcgatggagattgggtt
aatatagagtcaacgagtgaagaagaagaagaagaagaagaagaagaagaggaggcagag
gagttggaggaggatgatgtggttggcaaggctttgcagaagtgtgccaaaatatcggcc
gatttgagaagggagctccacggctcgtcggctcccgctgtgtctgatcgttatgctgaa
gtggaagctgcctctgtgaggattgtcactcaggatgatattatcgcggcatgtaggtct
gaccattctgactttcaacctattctcaagccataccagctggttggtgttaactttctt
cttctgctgtatcgaaagggtatcagtggagccattttggccgacgagatgggtctcggg
aagaccattcaggctataacatatttgatgttattgaaacatttacacaacgaccagggt
ccacatttgattgtctgtcctgcttcggttttggaaaactgggaaagggaactgaagaag
tggtgcccgtcattttctgttctccagtatcatggggctgcgcgatcggcatattcaaaa
gaattgagctctttggccaaagctggattgccgcctccttttaatgttattctcgtgtgc
tattcactatttgaaagacacagtggacagcagaaagatgatcgtaaaattctgaaacgt
tggcaatggagttgtgtgcttatggacgaagctcatgctttgaaggataaaaatagctac
aggtggaaaaacctaatgtctgttgcacgaagtgcaaaccagcgtctaatgctgacaggg
acacctctacaaaatgatttacatgagctctggtctatgctggagtttatgatgccagat
cttttcactactgaggatgttgacttaaaaaagctattaagtgctgaagatagagatttg
attggccgtatgaaatccatattgggaccatttattttgagacgcctaaaatctgatgtt
atgcaacaacttgttccaaaaatacagcgggttgagtatgttgtcatggaaaaggagcaa
gcagatgcctataaagaagccattgaggagtatcgtgcagcttcacaagctcgtattgca
aaaacctcagaggttaactcgaacagtatccttggagttcttccccggcggcagatctcc
aactattttgttcagtttcgtaagattgcaaatcatcctttactagtaaggcgtatttac
agtgatgaggatgttgttcgttttgccagaaagttacatccaatgggtgcatttggcttt
gagtgtactttagacaaagtaattggggaacttaacagttatagtgacttctctatccat
cggcttttactgtatcatggtgtcactgataagaaaggatttcttccggacaaatatgtt
atgcttgcagcaaagtctcaggcattggctgaacttcttccttcactgaagcaagctggg
catcgagttcttatttttagccagtggacgtcaatgcttgatattttggagtggacattg
gatgtgataggggttacatacagacgacttgatggaagtactcaggtgactgaaagacag
acgatagttgatacattcaatagcgacacttctatatttgcatgcttgctgtctacaaga
gctggaggccaaggattgaacttgacgggagctgatactgtagtcattcatgatatggat
ttcaacccacaaattgatcgacaggctgaagatcgttgtcatcgcattggccaagtgaag
cctgttactatatacaggctagtcaccaagggtacagttgatgaaaacgtttatgagatt
gcaaaaagaaagttagtgctagatgctgcggtcctggaatctggcttggagatggataat
gaaggcgaaacatccgagaagaccatgggagagatattatcgaaacttttgctcggttaa
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