Prunus mume (Japanese apricot): 103321025
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Entry
103321025 CDS
T03196
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 32
KO
K14776
ATP-dependent RNA helicase DDX10/DBP4 [EC:
5.6.2.7
]
Organism
pmum
Prunus mume (Japanese apricot)
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pmum03009
]
103321025
Enzymes [BR:
pmum01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
103321025
Ribosome biogenesis [BR:
pmum03009
]
Eukaryotic type
90S particles
Helicases
103321025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
TMPIT
Motif
Other DBs
NCBI-GeneID:
103321025
NCBI-ProteinID:
XP_008220991
LinkDB
All DBs
Position
LG2:13980171..13985238
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AA seq
748 aa
AA seq
DB search
MRKPMSKTSRKQKELSELQEIDLLKSWIESQQPECGSNPMSLPPLPSDAPVGRVGRVGPT
IFSRYAGATRFDQLPISKKTKDALRQSKYIEMTDIQKASLPHALCGRDILGAAKTGSGKT
LAFVIPLVEKLYRERWCPQDGVGSIILSPTREIASQTFDVLKAVGKHHNFSAGLLIGGRR
DVEAEKERVNELNILVCTPGRLLQHMDETPNFDCSQLQVLVLEEAGRCLDSGFEATLNAI
ISQLPNRRQTFLFSATQTKSVQHLARLSLKDPEYLSVHEKSVTATPKNLQQMAIIVPLDQ
KLDLLWSFIKTHLNSRILVFLSTRKQVKFVFEAFKKLRPGTPLKCLHGKMKQEGRMGTYS
QFTEKHSVLFSTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYDSSGRSVLFL
TPSEEKMLDKLQAAKIPIKKLKHNEGRMQPVSGLLAALLVKYPDTLQGLAKRAFITYLKS
VHNQKDKEIFDVMKLPIDEFSASIGLPMTPKIRFLNTKIKSKKVSKLSPIVEPEILDTEN
ELELPKEELDIGDFKEEGEKDALLTNDRENEAEEEGRKIGDLILATRISKKKKLKININR
PVGTRVVFDEEGNTQPPLAKLADTKNVSGLLDQIEDKKTEYYKKLREDLKKVDKEDKDLD
RQRRREKRMKDKLKQKRGNIEEEEDDDLSDSEGEPSEDRPHKRSKIYFDSDDEGEREESK
NKLGFKPDSVSLAEQEALALKLLSSMHS
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaacccatgtcaaagacctcgcgcaagcaaaaggaactttcggagctccaagaa
atcgatcttctgaaatcttggattgaatcccagcaacccgaatgcggctccaaccccatg
tctcttcctcctttgccctccgacgcccccgtcggccgcgtcggccgcgtcggccccaca
atcttctcgcgctacgccggcgccaccaggttcgaccagttgcccatctctaagaagacc
aaggacgccttacgccaatccaagtacatcgaaatgaccgatattcagaaggcgtctttg
ccccacgctctatgtggcagagatattcttggtgccgccaagactggctcgggaaagact
ctggcttttgtgataccgcttgtggaaaaattgtatagagagagatggtgtcctcaggat
ggggtaggcagcatcatactatctccaactagggaaatagctagtcaaacttttgatgtg
ttaaaagcggttgggaagcaccataattttagtgctggccttctaattggtggtcgcaga
gatgttgaagcagagaaggagcgcgtaaatgagctgaacatactggtttgcactcctggc
cggcttcttcagcacatggatgaaactccaaattttgattgttctcagcttcaggttttg
gtccttgaggaggcgggccgttgtcttgattcgggatttgaggcaacgctgaatgcaatc
atttcacagctacccaacagaagacaaacctttctgttctcagcaactcaaacaaagtcg
gttcaacatcttgcaagactcagtttgaaggatccagagtatctcagtgtgcatgagaag
tctgtgacagccactcctaagaatttgcagcaaatggcaatcatcgttcctcttgaccaa
aagttagacctgctgtggagcttcataaagacacacctaaattctaggattttagtgttt
ctatcaacccgaaaacaggtaaaatttgtctttgaagcatttaaaaagctccgtccggga
acacccttgaagtgtcttcatggtaagatgaagcaagagggacgaatgggaacatactca
cagtttactgaaaagcattcagttctcttctccactgatgtggcttcaagaggccttgat
ttcaacaaggcagttgactgggttgttcaggtggattgtccagaagatgttgcatcttac
atacatagagttggccgaactgctcgctatgattcttctgggcgatcagttttattcctg
acgccttcagaagaaaaaatgcttgataaattacaagcagcaaaaatacccataaagaaa
ttaaagcataatgagggacgaatgcaaccagtgtctgggttgttagcagctttgctggtc
aagtacccggatacgcttcagggtctggctaaaagggcctttatcacgtatctgaagtcg
gttcacaatcagaaggacaaggagatttttgatgttatgaaactaccaattgatgaattt
tcagcatcaataggtctaccaatgacccccaaaatccgttttttaaacacgaaaatcaag
tcaaagaaagtgtccaaactatctcccattgttgaaccagaaattttggacacggagaat
gaattggagcttcctaaagaggagcttgatattggtgattttaaggaagagggggagaaa
gatgctcttctaacaaatgatagagaaaatgaggcagaggaggaaggaagaaaaattgga
gatcttatactggcaactcggatttcgaagaaaaagaagttaaagatcaatatcaatagg
ccagtgggaactagagttgtctttgacgaggaaggcaacacgcaaccgccactagcgaag
ctggctgacaccaaaaatgtcagtggcctgcttgatcagattgaagacaagaaaaccgaa
tattataagaagcttagagaagatttgaagaaggtggacaaggaagacaaggatttggac
cgccagcgtcgccgtgaaaaacgaatgaaggataagttgaagcagaagagaggaaatata
gaagaagaggaggatgatgatctttctgattcagaaggagagccatctgaggatcgaccc
cacaagaggtcaaagatatactttgatagtgatgatgagggtgagagagaagaaagtaag
aataaactggggttcaagcccgactcagtatctttagcggaacaagaagctttggctctc
aaattgttaagttccatgcactcataa
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