Prunus mume (Japanese apricot): 103321046
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Entry
103321046 CDS
T03196
Name
(RefSeq) uracil-DNA glycosylase, mitochondrial
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
103321046
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmum03400
]
103321046
Enzymes [BR:
pmum01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
103321046
DNA repair and recombination proteins [BR:
pmum03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
103321046
Prokaryotic type
103321046
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
LAS2
Motif
Other DBs
NCBI-GeneID:
103321046
NCBI-ProteinID:
XP_008221018
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All DBs
Position
LG2:14107681..14110545
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AA seq
372 aa
AA seq
DB search
MRLVVSFSPGVRNFPANPKGTIIRALAPIHRKAYFYDRMSVNPMALEREQPRKEEMGSKN
KTKTLLDLFQPTASSAKRLKTDSIRATHSDSVSPVPPPSHDDSSSSDLTAQQKSRMELQK
LLAKARRNLSICSNRLSNSNSKGEGVKLEELLVEETWLEAFPSELQKPYAKTLSKFVENE
ICGGALPIYPPTHLIFNALNSTPFDRVKAVILGQDPYHGPGQAMGLSFSVPEGVKVPSSL
VNIFKELHQDLGCSIPSHGNLEKWAVQGVLLLNAVLTVRNHQANSHAKKGWEQFTDAVIK
TISQKREGVVFLLWGNSAQQKSKLIDESKHHILKAAHPSGLSANRGFFGCRHFSRTNQLL
EEMGIPPIDWQL
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgaggttggtcgtttcattttcccccggtgtacgtaattttcccgccaatccaaaaggc
acaataatacgagcattggcgccaatccacagaaaagcttatttttatgatcgaatgagc
gtaaatccgatggcgttggaaagggagcaaccaagaaaggaagaaatgggttccaaaaac
aaaaccaaaaccctactggatctcttccaacccactgcctcctccgccaaacgcttgaaa
accgattccatcagagccacacactctgactctgtctctcctgtaccaccaccatcccat
gatgactcttcctcttccgacctcaccgcccagcaaaagtcacgcatggaattacagaag
ctgctcgccaaagccagacgcaacctctctatctgctccaacagactctccaactccaac
tccaaaggtgaaggagtgaaactggaggagctactggtggaggagacgtggttggaagcg
ttcccctcggagcttcagaaaccctacgccaagaccctctccaagttcgtcgagaatgaa
atttgcggcggcgcccttcccatctacccgcctactcacttgatcttcaacgctctcaac
tccaccccttttgaccgggtcaaggctgtcatcctgggtcaggacccgtatcatggcccg
ggtcaagcgatgggcctctctttctctgttcctgagggtgtcaaggttccctcaagtctc
gttaatatattcaaggaacttcaccaagatcttggctgttcaattccctctcatggcaat
cttgaaaaatgggctgttcagggtgttctcttgctcaatgctgttctcactgttaggaat
catcaggctaactctcatgccaagaaaggatgggaacaatttactgatgctgttatcaaa
acaatttcacagaagagggaaggagttgtttttctcctatggggaaactctgctcagcag
aaatccaagttgattgatgagtcaaagcatcacattctcaaagcggcacatccttctggt
ttgtcagcaaacaggggcttctttggctgcaggcatttttctcgcacgaaccagcttctg
gaggagatgggtattcctcccatagactggcaactttga
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