Prunus mume (Japanese apricot): 103321093
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Entry
103321093 CDS
T03196
Name
(RefSeq) cell differentiation protein RCD1 homolog
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
103321093
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmum03019
]
103321093
Messenger RNA biogenesis [BR:
pmum03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
103321093
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rcd1
Motif
Other DBs
NCBI-GeneID:
103321093
NCBI-ProteinID:
XP_008221073
UniProt:
A0ABM0N8I6
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Position
LG2:14424768..14429617
Genome browser
AA seq
319 aa
AA seq
DB search
MANRPQSLAMNVSFGGPSASVPSIAGAQANKDRKMASAEHLVLDLSNPDLRENALLELSK
NKELFQDLAPFVWNSFGTIAALIQEIVSIYPVLSPPNLTAVQSNRVCNALALLQCVASHP
DTRMLFLNAHIPLYLYPFLNTTSRSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEII
PLCLRTMEMGSELSKTVATFIVQKILLDDMGLDYICTTAERFFAVGRVLGSMVTALAEQP
SSRLLKHIIRCYLRLSDNPRACDALRNCLPDTLREATFNNFLCEDPTTRRWLQQLLQNVG
VNRLPALQGGGGFDHMMVN
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaccggcctcagtcgcttgcgatgaatgtttcattcggaggtccaagtgcttca
gtaccaagcattgctggagctcaagcaaacaaggatcgtaaaatggcatcagcagagcac
ttggtgctggacctaagtaatcctgatcttcgagaaaatgcgcttcttgaactttctaag
aacaaggagttatttcaagatttggctcctttcgtgtggaattcttttggtactattgct
gcactcatacaggagatagtttcaatttaccctgttctatcaccaccaaatctgactgca
gtacaatccaatcgagtatgcaatgctctggctcttcttcagtgtgtagcttcccaccca
gatacaaggatgttgttcctcaatgctcatatacctttatatctgtatccttttctcaat
acaacgagcaggtcaagaccgtttgagtacttaaggcttactagtttaggagtcattggt
gccctagtgaaggttgatgatacagaagttattagtttccttctgtcaacagaaataatt
ccactgtgccttcgcactatggaaatgggcagtgaactgtcaaaaacagttgccacattt
atagttcaaaagattttgttggatgatatgggcttggactatatttgtactacagcagag
cggttttttgcagtaggtcgggttttagggagcatggttacagcacttgctgagcaaccc
tcatcacgccttttgaaacatatcattcgatgttatcttcgcttgtcagataatccaagg
gcttgtgatgctttaagaaattgccttccagatacgttaagagaggctacctttaataat
ttcctttgtgaagatccaactacaaggaggtggctgcaacaactgctgcaaaacgttgga
gtgaaccggcttcctgcactacaaggtgggggaggatttgatcatatgatggtgaattaa
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