Prunus mume (Japanese apricot): 103321174
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Entry
103321174 CDS
T03196
Name
(RefSeq) putative tRNA pseudouridine synthase Pus10 isoform X1
KO
K07583
tRNA pseudouridine synthase 10 [EC:
5.4.99.25
]
Organism
pmum
Prunus mume (Japanese apricot)
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pmum03016
]
103321174
Enzymes [BR:
pmum01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
103321174
Transfer RNA biogenesis [BR:
pmum03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
103321174
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pus10_C
Pus10_N_euk
Motif
Other DBs
NCBI-GeneID:
103321174
NCBI-ProteinID:
XP_008221179
UniProt:
A0ABM0N8T7
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Position
LG2:14960902..14966108
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AA seq
539 aa
AA seq
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MPSDTEEASQPTVNGDNVRALCDVVRELPIRAVIDLLSIGVCTRCILRLFGIREHVYYRS
SLSPSMLSSLLGDSTCSEKHMVDGNFREPVVCSICLGILQFTYWEDKKLVTENESANELA
VSISSLIRQQGFEIDSYSLEVSIPPIVLENDHTVWLYMKRKYESEPWFQGKSISECISAK
DALKISLMESLETMLGCKSNISAFRIRLTYTHRISSKTVENSVEGCHGGKRRKTGAGNGL
NTIDDDFKCSGPPIEAGAVVERSFVSFQANESSECLKLPLGQSNEPCCLEFHCYRTQIYV
GGRYLKYSRNVSQTCWIIDDERMGEASVEEILGSNILPLCRGDNYKFHAAGREDIDVRML
GSGRPFLLEIQNARYIPSEESVKFLETKINNLEKKLVGVKNLKLLGSQSWELMREGEAEK
QKQYTALVWISRPLKDEDLQSISSLEDLHILQRTPIRVLHRRSPLEREKIIHWMRIERIV
GSSQYFLLHLCTQAGTYIKEFVHGDLGRTQPSIGSIFTCRAEILRLDVTDVKMECFLTE
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgccaagcgacactgaagaggcttcacagcccaccgttaatggcgacaatgtacgagct
ctctgcgatgtggtccgagagttgcccattcgcgccgtgatagacttattgtccataggg
gtatgcaccagatgcattttgcgattatttgggatcagagagcatgtttattatcgttct
tcactatcaccgtcaatgttgagttcacttcttggagattcaacatgttcagagaaacat
atggtggatggtaatttcagagaaccggtagtttgtagcatttgtttgggaatcttgcag
ttcacttattgggaggataagaagttggtgacggaaaacgagagcgctaatgagttggct
gtttccatttccagtctgattaggcaacagggctttgagattgacagctattctcttgaa
gtgtctatacctccaattgtcctggaaaacgatcacactgtttggttgtatatgaaaaga
aagtatgaatctgaaccttggttccaaggaaaatcaatttctgaatgcatttctgcgaag
gatgctctaaaaatttctcttatggaatcccttgaaacaatgttgggttgtaaatccaac
ataagcgctttccgcatccgtttaacatacactcaccgtatatcatcaaaaacagttgag
aattctgtagaggggtgccacggaggtaaaagaagaaaaacaggcgctggaaatggtttg
aacacaattgatgatgacttcaaatgctctggcccaccaattgaagctggtgccgttgtt
gaaaggtcttttgtgagttttcaagctaatgaatcgtctgagtgcctgaagttaccatta
gggcagtccaatgaaccctgctgtttggagtttcactgctaccggacgcaaatctatgtt
ggtgggagatacctgaagtactcaagaaatgtgagtcaaacctgttggattattgatgat
gagagaatgggagaagcatctgtcgaggagatactaggtagcaacattcttcctctatgt
cgtggtgataactataagtttcatgctgctggcagagaagatatagatgttcggatgttg
ggttctggaaggcctttcctccttgaaatacaaaatgcacgctatatcccatctgaagag
tctgtaaaatttttggaaacaaagataaataacttggaaaagaaactggtaggtgtgaaa
aatctgaaactgttaggcagtcagtcgtgggaactgatgcgtgaaggggaagcagagaaa
cagaagcaatacactgcgctagtgtggatttctcgtcctctcaaggatgaagacttgcag
tctatatcttcacttgaagacttgcatattctgcagaggactccaatcagggtactgcat
cgccgaagtccattagaacgtgaaaagatcatacattggatgagaatcgagaggattgtt
ggaagttctcagtattttcttctgcatctatgtacgcaggctggaacatatatcaaggaa
ttcgttcatggggacctcggacgcacccaacctagcattggatcaatctttacttgtaga
gcagagatactgcggcttgatgtaacagatgtgaaaatggaatgttttctcactgaatga
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