Prunus mume (Japanese apricot): 103321204
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Entry
103321204 CDS
T03196
Name
(RefSeq) TATA-box-binding protein
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
103321204
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmum03000
]
103321204
03021 Transcription machinery [BR:
pmum03021
]
103321204
Transcription factors [BR:
pmum03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
103321204
Transcription machinery [BR:
pmum03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
103321204
RNA polymerase III system
TFIIIB
103321204
RNA polymerase I system
SL1/TIF-1B
103321204
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBP
DUF3378
DUF4295
Motif
Other DBs
NCBI-GeneID:
103321204
NCBI-ProteinID:
XP_008221250
LinkDB
All DBs
Position
LG1:482306..485813
Genome browser
AA seq
200 aa
AA seq
DB search
MAEQGLEGSQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV
IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAQFKDFKIQNIVG
SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRGE
TYEAFENIYPVLTEFRKNQQ
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atggcagaacaagggttagaaggaagccaaccagtagatctcaagaagcacccttctgga
attgtccctactctccagaatattgtctccacagtaaatttagactgcaaattggatctc
aaggccattgcactgcaagctcgtaacgctgaatacaaccccaagcgttttgcagctgtg
attatgagaataagagaaccgaagacgactgcattgatatttgcatctggtaagatggtt
tgtacgggagctaagagtgaacaacaatcaaaattggcagcacgaaagtatgctcgaatc
atccagaaactcggttttccagctcagttcaaggatttcaaaatccaaaatatagttggt
tcttgtgacgtgaaatttcccataagacttgaaggcctggcgtattcccatggtgccttc
tcaagttatgaaccagaactgttccctggcttgatttatcggatgaaacaaccgaagatt
gtgcttctgatttttgtgtctggaaaaatagttcttacaggggcgaaggtaagaggtgag
acatatgaagcctttgagaacatttacccagttcttacagaattcaggaaaaatcagcaa
tga
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