KEGG   Prunus mume (Japanese apricot): 103321204
Entry
103321204         CDS       T03196                                 
Name
(RefSeq) TATA-box-binding protein
  KO
K03120  transcription initiation factor TFIID TATA-box-binding protein
Organism
pmum  Prunus mume (Japanese apricot)
Pathway
pmum03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:pmum00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    103321204
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:pmum03000]
    103321204
   03021 Transcription machinery [BR:pmum03021]
    103321204
Transcription factors [BR:pmum03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   TATA-binding proteins
    103321204
Transcription machinery [BR:pmum03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     103321204
  RNA polymerase III system
    TFIIIB
     103321204
  RNA polymerase I system
    SL1/TIF-1B
     103321204
SSDB
Motif
Pfam: TBP DUF3378 DUF4295
Other DBs
NCBI-GeneID: 103321204
NCBI-ProteinID: XP_008221250
LinkDB
Position
LG1:482306..485813
AA seq 200 aa
MAEQGLEGSQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV
IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAQFKDFKIQNIVG
SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRGE
TYEAFENIYPVLTEFRKNQQ
NT seq 603 nt   +upstreamnt  +downstreamnt
atggcagaacaagggttagaaggaagccaaccagtagatctcaagaagcacccttctgga
attgtccctactctccagaatattgtctccacagtaaatttagactgcaaattggatctc
aaggccattgcactgcaagctcgtaacgctgaatacaaccccaagcgttttgcagctgtg
attatgagaataagagaaccgaagacgactgcattgatatttgcatctggtaagatggtt
tgtacgggagctaagagtgaacaacaatcaaaattggcagcacgaaagtatgctcgaatc
atccagaaactcggttttccagctcagttcaaggatttcaaaatccaaaatatagttggt
tcttgtgacgtgaaatttcccataagacttgaaggcctggcgtattcccatggtgccttc
tcaagttatgaaccagaactgttccctggcttgatttatcggatgaaacaaccgaagatt
gtgcttctgatttttgtgtctggaaaaatagttcttacaggggcgaaggtaagaggtgag
acatatgaagcctttgagaacatttacccagttcttacagaattcaggaaaaatcagcaa
tga

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