Prunus mume (Japanese apricot): 103321259
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Entry
103321259 CDS
T03196
Name
(RefSeq) ABC transporter E family member 2
KO
K06174
ATP-binding cassette, sub-family E, member 1
Organism
pmum
Prunus mume (Japanese apricot)
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pmum03009
]
103321259
Ribosome biogenesis [BR:
pmum03009
]
Eukaryotic type
Pre-40S particles
Other pre-40S particles
103321259
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
Fer4_RLI
SMC_N
AAA_21
Fer4
AAA_22
AAA_15
AAA
Fer4_6
Rad17
AAA_23
AAA_29
RsgA_GTPase
NACHT
Fer4_2
Fer4_21
AAA_16
nSTAND3
TsaE
SRP54
Fer4_10
AAA_33
AAA_28
AAA_5
Fer4_4
ORC-CDC6-like
AAA_24
Fer4_9
Fer4_16
Fer4_7
Fer4_17
Mg_chelatase
AAA_13
Motif
Other DBs
NCBI-GeneID:
103321259
NCBI-ProteinID:
XP_008221272
LinkDB
All DBs
Position
LG2:complement(15507371..15513526)
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AA seq
605 aa
AA seq
DB search
MADRLTRIAIVSSDRCKPKKCRQECKKSCPVVKTGKLCIEVTPASKIAFISEELCIGCGI
CVKKCPFEAIQIINLPKDLDKDTTHRYGPNTFKLHRLPVPRPGQVLGLVGTNGIGKSTAL
KVLAGKLKPNLGRFNNPPDWQEILTYFRGSELQNYFTRILEDNLKAIIKPQYVDHIPKAV
QGNVGEVLNQKDERDMKEELCADLELNQVIDRNVGDLSGGELQRFAIAVVAIQNAEIYMF
DEPSSYLDVKQRLKAAQVVRSLLRPNSYVIVVEHDLSVLDYLSDFICCLYGKPGAYGVVT
LPFSVREGINIFLAGFVPTENLRFRDESLTFKVAETPQESAEEIETYARYKYPSMTKTQG
NFRLRVVEGEFTDSQIIVMLGENGTGKTTFIRMLAGLLKPDIVEDSNVEIPEFNVSYKPQ
KISPKFQSTVRHLLHSKIRDSYTHPQFMSDVMKPLLIEQLMDQEVVNLSGGELQRVALCL
CLGKPADIYLIDEPSAYLDSEQRIVASKVIKRFILHAKKTAFVVEHDFIMATYLADRVIV
YEGKPSIDCVANSPQSLLTGMNLFLSHLDITFRRDPTNYRPRINKLESTKDREQKAAGSY
YYLDD
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atggcagatcggttaacccgtatagcaatagtgagctccgacagatgcaagcctaagaag
tgccgccaggaatgcaagaagagctgtcctgtcgtcaagactgggaaactatgtatcgag
gttacccctgcatccaagattgcttttatctcagaagaattgtgcattgggtgtggtatc
tgtgttaagaaatgcccatttgaagcaatccaaattatcaacttgccaaaggatttagac
aaagatacaacacatcgttatgggcctaacactttcaaactacacaggttaccagtccca
aggccagggcaagtacttggtttggttggaactaatggcattgggaagtcaactgcccta
aaagttttggctggaaagttgaaaccaaatttaggtcgtttcaataatcctccagattgg
caggaaattttgacctactttcgaggatctgagttgcagaattattttacccgtatcctg
gaagacaatttgaaggccattataaagccccagtatgttgatcacattccaaaagcagtt
caaggaaatgttggggaggtgctcaaccagaaagatgaaagggatatgaaggaagaactg
tgtgctgatcttgagctgaaccaggttatagatcgtaatgtaggggatttatcaggtggg
gagcttcaaagatttgccattgctgtcgttgccatacagaatgcagagatatatatgttt
gacgaaccttcaagttatcttgatgtgaaacagaggcttaaagcagcccaagttgtccga
tctttgctcaggcctaatagctatgtaattgttgtggagcatgatcttagtgtcttggat
tacttatcagacttcatttgctgtttatacgggaaaccgggtgcatatggagttgtaact
cttcctttctcagttagagaaggaattaacatcttcttggccggatttgttcctacagaa
aatcttaggttccgggatgaatctctgacctttaaggttgctgagactccacaggaaagt
gctgaggaaattgagacatatgcacgatataaatacccatctatgactaaaactcaggga
aactttaggcttcgtgttgttgagggagaatttacggattctcaaattattgttatgctg
ggtgagaatggaacagggaagacaacatttatccgtatgctggctggtctattgaaacct
gatattgtagaagattccaatgtggagatacctgaattcaatgtttcttacaaaccccag
aaaatcagtccaaaatttcaatccactgtcagacacttgttacattcaaaaattcgtgat
tcatatacccatccccagttcatgtcagatgtgatgaagcctcttcttattgaacaattg
atggatcaagaagttgtgaatctctctggtggagagctgcaaagggttgcattatgctta
tgcctcgggaagcctgcagatatctatcttatagatgaaccaagtgcctatcttgattct
gagcagcgtattgttgcttcaaaagtcataaagaggtttatcctacatgctaagaaaact
gcattcgtggttgaacatgactttattatggctacctacttggcagatagagttattgtc
tatgaggggaagccatcaattgattgtgttgcaaattctccacagtcattattgactggg
atgaatctattcttatctcatcttgatatcacatttcgacgtgaccccactaactaccgc
ccaagaatcaacaaattggagtcaacgaaggatagggaacaaaaagctgctggatcctat
tattacttggatgattga
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