Prunus mume (Japanese apricot): 103321534
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Entry
103321534 CDS
T03196
Name
(RefSeq) vesicle transport v-SNARE 12
KO
K08493
vesicle transport through interaction with t-SNAREs 1
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
103321534
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmum04131
]
103321534
Membrane trafficking [BR:
pmum04131
]
SNARE
SNAP-25[N] (Qb)
Vti1
103321534
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-SNARE
V-SNARE_C
Sec20
FliJ
YqjK
DUF3792
PLU-1
DUF3037
Exonuc_VII_L
Use1
Motif
Other DBs
NCBI-GeneID:
103321534
NCBI-ProteinID:
XP_008221570
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Position
LG2:16897639..16899960
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AA seq
223 aa
AA seq
DB search
MSEVFEGYERQYCELSANLSRKSNSAALLPDHEQKKQRFSEIKVGLDDADALIRKMDLEA
RSLQPSVKAVLLAKLREYKSDLNNLKREIKRITSPDANQAAREELLESGMADVHAVSSDQ
RERMTMSVERLNQSSDRITESRRTILETEELGVSILQDLHQQRETLLHSHQKLHGVDDAI
DKSKRVLTAMSRRMTKHKWIIGSVIGALIVAILFILYFKFSHH
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaggtgttcgaaggctacgagcgtcagtactgcgagctctccgcaaatctctca
cgaaaatctaactccgccgcccttcttcctgaccatgagcagaagaagcagaggttttct
gagattaaagttggcttggacgatgctgatgctttgattcggaaaatggaccttgaggcc
agaagcttgcagccgagtgtaaaggccgtgcttcttgctaagctaagggaatataaatcc
gatctcaataacttgaaaagggaaatcaaaagaattacatcacctgatgctaatcaggct
gctcgcgaagagctgttggagtccggaatggctgatgtccatgcggtttcttctgatcaa
agagagagaatgacaatgtctgttgagagattaaatcaatcaagtgatagaatcacggag
agtaggagaaccatactggagactgaagagcttggtgtctccattctccaagatttgcat
caacaacgggaaactctcctgcattcccatcaaaaacttcatggggtagatgacgccatt
gacaagagtaaaagagttttaactgccatgtcacggaggatgaccaagcataaatggatc
atcggctcagtcatcggagctcttatcgttgcaatcctgtttattctatattttaagttt
tctcatcattaa
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