Prunus mume (Japanese apricot): 103321753
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Entry
103321753 CDS
T03196
Name
(RefSeq) dual-specificity RNA methyltransferase RlmN
KO
K06941
23S rRNA (adenine2503-C2)-methyltransferase [EC:
2.1.1.192
]
Organism
pmum
Prunus mume (Japanese apricot)
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pmum03009
]
103321753
Enzymes [BR:
pmum01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.192 23S rRNA (adenine2503-C2)-methyltransferase
103321753
Ribosome biogenesis [BR:
pmum03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
103321753
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
Radical_SAM_2
Fer4_12
DUF5703
RlmN_N
zf-C2H2_11
Motif
Other DBs
NCBI-GeneID:
103321753
NCBI-ProteinID:
XP_008221803
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All DBs
Position
LG2:complement(18326532..18329536)
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AA seq
459 aa
AA seq
DB search
MGRMWMRRMLLRQNSLPLLKPPMACLLTPATLQKPISSPFLKPLPPTLAPLAWSHRRSLS
TATACSLPDPLVSLDGISSHFGGDDGVGTSNKGLKVLLKGMTYDELEKWVQSHGYRPGQA
LMLWKRLYGNGIWAHHSDQLEGLNKDFKKMLSENAEFKALSLKQVITAADGTRKILFTLE
DGLVIETVVIPSDSSRNTVCVSSQVGCAMNCQFCYTGRMGLRRHLTAAEIVEQAVFARCL
LTSEVGEITNVVFMGMGEPLQNIDNVLKATDIMLHDQGLHFSPRKITVSTSGLVPQLRRF
LKESNCALAVSLNATTDEVRNWIMPINRKYNIGLLLQTLREELRFKNNYKVLFEYVMLAG
VNDSIEDAGRLADLVQGIPCKINLLSFNRHGGSQFRPTSDEKMIEFRNLLAEAGCVVFLR
SSKGDDQMAACGQLGNPGAIQAPLLRVPEQFKMAMEVSL
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgggtcgtatgtggatgagacggatgctgctcagacaaaactctctacctctgctgaag
cctcccatggcctgcttgttaacgcctgcgacactccaaaagcccatctcctctcccttt
ctgaaaccattaccaccaactctcgctcctcttgcctggtcccaccgtcgctctctttca
acagcaacagcttgttctcttccggatcctctcgtttccctcgatggaatttcttcccat
tttgggggagatgacggcgttggaacttcaaacaagggcttgaaggttcttctcaaggga
atgacatacgatgagcttgaaaaatgggttcagtctcatggctacaggcctggccaggct
ttaatgctatggaaacgtctctatgggaacggtatttgggcgcatcatagtgatcagctg
gaaggtttgaataaagattttaagaagatgttgagtgagaatgctgaattcaaggcattg
tctttgaaacaagttattaccgccgctgatggaactaggaagattttgttcactttggaa
gatggattggtgatagaaactgttgtcataccttccgatagtagcaggaatactgtttgt
gtttcaagtcaagtgggctgtgccatgaattgtcagttctgctacactggcaggatgggt
ttaagaagacatctgactgctgccgagattgtggagcaggctgtctttgcacggtgcctg
cttacgagtgaagttggtgaaattacaaatgttgtatttatgggaatgggagaaccactt
cagaacattgacaatgttcttaaagctacagacataatgctacatgatcaaggccttcat
ttcagtcctcgcaagatcactgtttcaacaagtgggcttgtcccccagctgaggcgtttc
ctcaaagaatctaattgtgctttagctgttagtttgaatgcaacgactgatgaggtcaga
aactggatcatgccaattaaccggaaatataacataggcttgcttcttcagacccttagg
gaggaacttcgcttcaagaataactacaaagttctctttgaatatgtaatgcttgcagga
gttaatgatagcattgaggatgcagggaggcttgctgatcttgttcagggaattccatgc
aagatcaatcttctctcatttaatcgtcatggcggatcccaattcagaccaaccagtgac
gagaagatgattgagtttcgaaatcttttggctgaagcagggtgtgttgtcttcttgcgg
tcgagtaaaggtgatgatcagatggctgcttgtggtcagcttggaaatcctggtgcaatc
caggctcccttgctccgtgtgccagagcaattcaaaatggcaatggaagtgtctctgtga
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