KEGG   Prunus mume (Japanese apricot): 103321789
Entry
103321789         CDS       T03196                                 
Name
(RefSeq) ubiquitin
  KO
K02977  ubiquitin-small subunit ribosomal protein S27Ae
Organism
pmum  Prunus mume (Japanese apricot)
Pathway
pmum03010  Ribosome
pmum04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:pmum00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    103321789
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    103321789
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:pmum03011]
    103321789
   04121 Ubiquitin system [BR:pmum04121]
    103321789
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pmum04147]
    103321789
Ribosome [BR:pmum03011]
 Ribosomal proteins
  Eukaryotes
   Small subunit
    103321789
  Archaea
    103321789
Ubiquitin system [BR:pmum04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   103321789
Exosome [BR:pmum04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   103321789
  Exosomal proteins of colorectal cancer cells
   103321789
SSDB
Motif
Pfam: ubiquitin Rad60-SLD Ubiquitin_2 Rad60-SLD_2 Ribosomal_S27 Plexin_RBD Dsc3_N TBK1_ULD DUF2604 Ubiquitin_5 OTU1_UBXL
Other DBs
NCBI-GeneID: 103321789
NCBI-ProteinID: XP_008221845
LinkDB
Position
LG2:18566390..18567116
AA seq 134 aa
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKKKKVKLAVLQFYKVDDSGKVDRHYCG
KCGLTYVYQKAGGD
NT seq 405 nt   +upstreamnt  +downstreamnt
atgcagatcttcgtgaaaaccctaacgggtaagaccattaccctagaggtcgagtcctct
gacaccattgacaatgtgaaggccaagatccaagacaaggagggcattcccccagaccag
cagcgcctcatcttcgccggaaagcagctcgaggacggccgaaccctagcagattacaac
atccagaaggaatcgaccctccaccttgtgcttcgcctccgtggtggcgccaagaagcgt
aagaagaagacctacaccaagccaaagaagatcaagcacaagaagaagaaggtcaagctt
gcggtgctccagttctacaaagttgatgattctgggaaggtcgacaggcactactgcggc
aagtgtgggttgacctatgtttaccagaaggctggcggtgattag

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