KEGG   Prunus mume (Japanese apricot): 103321859
Entry
103321859         CDS       T03196                                 
Name
(RefSeq) coilin isoform X1
  KO
K13150  coilin
Organism
pmum  Prunus mume (Japanese apricot)
Brite
KEGG Orthology (KO) [BR:pmum00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pmum03041]
    103321859
Spliceosome [BR:pmum03041]
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    103321859
SSDB
Motif
Pfam: Tudor_Coilin Coilin_N
Other DBs
NCBI-GeneID: 103321859
NCBI-ProteinID: XP_008221928
LinkDB
Position
LG2:19144758..19149332
AA seq 647 aa
MTTMTASVRLRVTFKERHILSKSQKTEGLKRSWVLLKPHHRTISDLAAHLLHAFDLNASC
PDGLLISMDGFVLPPFESTSIFRDKDIISVKRKGGTLSEIALVDDGTDSLEIEEIVERRP
LNTGIKLLANEEFEKEDEPYQLEDPLTVEDAPETGSSRRSKKRKLSNKPQSSKRKRIKSA
TTEECSGFPEDLQNDVHAEKHQSRVLPRKSRSKKDKSFAGEDELDNLSNPQTDKRTNKTC
KSTSNGKRSCQLQEKEVKGVVSSDTPGGSKKFPSRSARRKKAKRQWLREKLKGEKEELNK
RQLLKPDNQQSSGKSNQRCPEEHQQPNTDSEEDEQSNTDTDEGDEQPKTDNNEVHVQPST
DNDKEDDIVPVVIRPGHIRFENLGKVDADHPIQQNRTPVETFQWNGITSKKKGQKWGMEK
TPHSRKSDYKDLNPESPETLGSEKEIPVDDPIDFNQLELCTTLPEEGDQIAYRLIELSAC
WTPEVSSYRVGKVSWYDPQSNKIMLVQVPGYPIVFEETDDEASDVLPDASLYGEDGSLEV
DYSSLIDVRIVKHGNPNTAKAVTGDQNAASGPRLNNNMEIRAAPQENGKVSAWDEISQAL
NAKKAELSQSDGWSRNEGSVRNSWSYRGLRGSALGPVVARLRTQSGL
NT seq 1944 nt   +upstreamnt  +downstreamnt
atgacgacgatgacggcgagtgtgaggcttcgcgtcacattcaaggagcgccacattctg
agcaagtcacagaagacagagggactcaagcgaagctgggttctactaaaacctcaccac
cgcaccatctcagacctcgccgcccatctccttcacgctttcgacctcaacgcttcttgc
cccgatgggcttctcatctccatggatgggtttgtgttaccgccttttgagtccacctcc
attttcagggataaagatattatcagtgtgaaaaggaaggggggcacattgtctgaaatt
gccttggttgatgatgggacagactctcttgagatagaagagattgtggagaggcggcct
ctgaatacaggtataaagcttctggctaatgaggaatttgaaaaggaggatgaaccttac
cagttggaagatccgttgactgtagaagatgcacccgagaccggttcaagcagacgttcc
aagaagaggaagctttcaaataaacctcagagctcgaagaggaagagaattaaatctgct
acgactgaagaatgttcaggttttccagaagaccttcagaatgatgtccatgcagagaag
catcagtctcgtgtcctccccagaaagagtcgttccaagaaggacaagtcatttgctgga
gaggatgaactggataatttaagcaaccctcaaactgataaaagaaccaataaaacatgt
aaatctacgtccaatggaaagaggtcctgtcagcttcaagagaaggaagtaaaaggtgtg
gtttcatctgatacacctggtggaagtaaaaagtttcctagtagaagtgctcgacgtaaa
aaggccaaaaggcaatggttgagggaaaaattgaagggtgagaaggaggagctcaataag
aggcaattgctcaaaccagataatcagcaatcgtctggcaaaagtaatcagagatgtcct
gaagaacatcaacaaccgaacacagacagtgaagaggatgaacaatcaaacacagatact
gatgaaggggatgagcaaccgaaaacagataataatgaagtacatgtgcaaccaagcaca
gacaatgataaagaggatgacattgttcctgtagtaattaggcctgggcacattcggttt
gaaaaccttggaaaagtggatgcagatcatcctattcagcagaatagaaccccagtggaa
acttttcagtggaatggaataaccagcaagaagaagggtcaaaaatggggtatggagaaa
acaccacattcaagaaaaagtgactacaaagatctgaacccagaatcgcctgaaacattg
ggtagtgaaaaagagattcctgtagatgatcccatagacttcaatcagcttgagctctgt
accactttacctgaggaaggtgatcaaattgcatatcgtttgattgaattatcagcatgc
tggacccctgaagtttcctcataccgtgttggaaaagtgtcatggtacgaccctcaatca
aataagattatgctagtacaggttccaggatatcccattgtttttgaggagacagatgat
gaggcatctgatgtactaccagatgcatccctttacggggaagatggctctctagaggta
gattattcttcacttattgatgtccgcattgtcaagcatggcaacccgaacacagcaaag
gcagtcactggcgatcaaaatgctgcatcaggtcccaggctcaacaataacatggaaatt
cgtgctgcaccacaagaaaatggaaaagtaagcgcatgggatgaaatcagccaggcattg
aatgccaagaaggcagagctgtctcagtcggatggttggagtagaaatgagggctcggta
aggaactcatggtcatatagaggcttgagaggtagcgcattgggtccagtcgtggctcgt
ttaagaacgcaaagtgggctgtaa

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