Prunus mume (Japanese apricot): 103321868
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Entry
103321868 CDS
T03196
Name
(RefSeq) protein GLE1 isoform X1
KO
K18723
nucleoporin GLE1
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum03013
Nucleocytoplasmic transport
pmum03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
103321868
03015 mRNA surveillance pathway
103321868
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmum03019
]
103321868
Messenger RNA biogenesis [BR:
pmum03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
103321868
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GLE1
SRI
Motif
Other DBs
NCBI-GeneID:
103321868
NCBI-ProteinID:
XP_008221940
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All DBs
Position
LG2:complement(19208157..19215304)
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AA seq
643 aa
AA seq
DB search
MLQFNRDCLWGIYAFRGAFKLELRCPQKVDGITFDPEPDWSFEALLSEIDELERKINSSS
KVSVPFTKERPRDISDSKSNGRTSASPFVVPVFEDEMDNIDSEDEEAHDQSSVAVKRFNF
VDLYLSDSDDSGDDLSLEAQPGLMEKGESGESILFELSREHQFRVKEEIRNQISALETDL
KTESQKSISAIFRVERYREERCEMERKLDTQYQRNIAEALNNHLTAVQRDLEVRSQIEER
KIRSDAAYEDAKRKEKALQEEKLRQERVKAEAEAKRAEEAKRAEDAKRAALEAQRRAAKE
AAEREASEASKRADSGSAQEGTYRPQINALNAQSSGKPVAAGNILKAAESALNLEQGRLQ
KLKQFDDENQALRLRSKEDFRKYERQISKLVQQITGTKDSVRQKAGELVNIFNDARCPQS
ISVAAFAKKVVSNCKTPRNAAFACGHVIVLVTSKVPTAMDLILAELHRACIYTVPKHYSQ
SAFESKEAYYKAIGFQEDEGKTESVDNYLARLESYMKLYGALVQTEIYGFQNVHGLKEGW
AWLARFLNALPANRYTAVALNAFLHMAGYSLFKKYKSQFRKMLNIISDNFLNALRERGDS
NLNPVIAEIDAYLKDNKFLCEPEGRSLEGSLLSDVYVPESDYY
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgttacaatttaatcgcgattgtttgtgggggatttatgcatttaggggagcttttaag
ttggagcttcgttgtccccaaaaagttgatggaattacatttgaccctgagcctgattgg
agcttcgaagctctactatcggagatagatgaattggaaagaaagatcaacagctcttct
aaggtttcagtgccttttactaaagaaagaccacgagatatatccgattcaaagagcaat
gggaggacttctgctagcccatttgttgtgcctgtcttcgaagatgagatggacaacatt
gacagtgaagatgaggaggctcatgatcaaagttctgtggcagttaaacggtttaatttt
gttgatctttatctcagtgacagtgatgactctggtgatgacttgtctcttgaagcccaa
cccggcctgatggagaagggtgaatcaggggaaagtattttgttcgagctatcccgtgaa
catcagttcagagtgaaggaagaaatcaggaaccaaatatcagcattagagacagatctg
aagactgaaagtcaaaagtctatttctgcaatctttcgagttgagagatatagagaagaa
agatgtgaaatggaaagaaaacttgatactcaatatcaacgcaatatagcagaagcactt
aataatcacttgactgctgtccagagagaccttgaagtcagatctcaaatagaagaaaga
aaaataagaagtgatgcagcttatgaagatgctaaaagaaaggaaaaagctctgcaagaa
gaaaaacttcgacaagaacgagtgaaagcagaagctgaggcaaaaagagctgaggaagca
aaaagagcagaggacgcaaaaagagctgctttggaagctcagagaagagcagctaaagaa
gctgcagaaagggaagcttctgaagcctcaaagagggctgattctggatcggcacaagaa
ggaacttacagacctcagataaatgctttgaatgctcaatccagcggaaaaccagtagcg
gcaggtaatatactcaaggctgcagaaagtgctctgaatctagagcaggggagactacaa
aagcttaaacagtttgatgatgaaaaccaggcactgagattacgctccaaagaggatttc
aggaagtatgagaggcaaatttctaagttggttcagcaaattacaggaacaaaagacagt
gttagacaaaaagcaggtgaactagtcaatatctttaatgatgctcgctgccctcaatct
atcagcgttgcagcatttgcgaagaaggttgtttccaattgtaaaaccccacgtaatgct
gcttttgcatgtggccatgtcattgttcttgttacttcaaaggttccaactgcaatggat
cttattctggctgagttacacagagcttgcatctatacagttccaaagcactattcacag
tccgcatttgaatcaaaagaggcatactataaagctattggattccaagaagatgaagga
aagactgagagtgttgacaattatttggcacgattagagtcatatatgaaactatatggg
gccttggttcagacagaaatttatgggttccaaaatgtgcatggcctgaaagaaggttgg
gcatggcttgcaaggtttttaaatgctcttcctgccaacagatatactgctgttgcactt
aacgcattcctacatatggcagggtactctctcttcaaaaagtacaaatctcaattcagg
aagatgctgaacatcatctcagacaacttcctgaatgcactaagagaacgaggagattcc
aatctgaacccagtcattgcagaaatcgatgcctacttaaaggacaacaaatttctttgt
gagcccgagggaaggagcctggagggctctttgctatcagatgtttatgtgcctgaatca
gattactactaa
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