Prunus mume (Japanese apricot): 103321875
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Entry
103321875 CDS
T03196
Name
(RefSeq) protein SDA1 homolog
KO
K14856
protein SDA1
Organism
pmum
Prunus mume (Japanese apricot)
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pmum03009
]
103321875
Ribosome biogenesis [BR:
pmum03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
103321875
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SDA1_HEAT
SDA1_dom
SDA1_C
Motif
Other DBs
NCBI-GeneID:
103321875
NCBI-ProteinID:
XP_008221948
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Position
LG2:19301102..19306552
Genome browser
AA seq
810 aa
AA seq
DB search
MNSHRTLTGMSPEQLSASGSEKLSLPSLQSKMKCDPEGYESELHLIYNQFKSSLELFKQQ
ADLGFKSVSGIRNDPAVAKDLGDRAMFLAHVTPFYPTHLAHFPAQLAEFLRSSARTLPSG
LCLHVTQALILLMNRKMVDMGDNLALFMELQTFGNKALRNLAYSHVVHSIKRMNQKHKNE
VKNRALQNVLFEMLRQEDETKAKRALITLRELHQRKLWFDERTANAICTACFHPSSRIMI
ACLSFLLDYEKFEDDDSDASSSEDEAPHTPQIVLSRESIYKAHHQGTIASKKKKKAKLQR
AMRSMKKQQRLSSEKSNSNYHTPLNHLKDPQGFAEKLFSRLQTCNERFEVKMMMLKVIAR
TIGLHRLILLNFYPFLQKYIQPHQRDVTSLLAAAVQACHDMVPPDAIQPLFKQLVNQFVH
DRSRPEAIAVGLNVTRELCLRIPLLMTEDLLQDLALYKKSHEKAVSIAARSLIGLFREIC
PSLLIKKDRGRPTNPKARPKAYGEVNVLSNVPGVELLEEDDGNEDGDDADEASLSGTDDD
LDHDEMVASSDDEDNHIANSDSGSEEDSVVAEDVDSDGSIDDNDSDVSGDEDDEEDEDDE
DEEDEENESNNNDAKDSGTGVKDNKAKKRKVADFDKQLTDADASLRALKRLAKENMEHTS
LDSTDCFLSNEDFQRIKELKAKKDARFALTQHGLLKKGADSKSPAFKIPNSDELSIKRVD
PAKLEVHVKKRMSKEERLALVRAGREDRGKYQARAAIKQKKTGGMSNRQKEHKKPMPLAA
KRAKVAKSRIDKKKKQQRAGKQFRGKKAWK
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atgaattctcaccgcaccctcaccggcatgtcgcccgagcaactctcagcctcgggctcc
gagaagctgagcttgccttcgcttcagtcgaagatgaagtgcgacccggaagggtacgag
tcggagcttcacctgatctataatcaattcaagtcgtcgctggagctcttcaagcaacaa
gcggatcttgggttcaagtcggttagcggcattaggaatgacccggccgtggcgaaggac
cttggcgatcgggccatgttcttggctcacgtcacccctttttacccgacccatctggcc
catttccccgctcagctcgccgaatttctccgctcctccgcccgaacacttccgtcgggg
ctctgcttgcacgtcacccaagctctcattcttctcatgaatcgaaagatggtggatatg
ggagacaatctagctttgttcatggagctacagacttttggcaataaggcattgagaaac
ctggcatattctcatgtggttcatagcattaagagaatgaatcagaaacataagaatgaa
gtaaagaatcgggcgcttcagaatgtcttgtttgagatgcttcggcaagaggatgaaaca
aaagcgaagagggcgcttatcacgctacgagagcttcaccagagaaagttgtggttcgat
gaaagaacagccaatgcaatttgtactgcatgctttcatccatcgtcaaggataatgatt
gcttgcctctcatttctgctggattacgagaagtttgaagatgatgatagtgatgcatca
agtagcgaagatgaagctcctcacacacctcaaatagtccttagtagagagtctatttat
aaggcacaccatcaaggtacaattgctagcaagaagaaaaagaaagcaaaactacagcgt
gccatgcgtagtatgaaaaaacagcaacgcctgtcatcagaaaaaagtaattcaaattat
catacgccacttaatcatttgaaagatccacagggatttgctgagaagctattctcccgc
cttcaaacctgcaatgaacgatttgaggtcaagatgatgatgttgaaagtaattgctcgc
acaattgggcttcaccgcttgattttgctgaatttttatcctttccttcagaaatatatt
cagcctcaccaacgtgatgtcacaagtttacttgctgcagcagttcaggcctgccatgat
atggttcctcctgatgcaatacaaccacttttcaaacaactagtgaatcaatttgtacat
gatcgctcacgtccagaggccatagctgttggactgaatgtaacgagggaactatgttta
cgaattcctttgttgatgaccgaagatttgctgcaagatcttgcattatataagaaatca
catgagaaagcagtttcaatagcagcccgttcacttattggtttattcagagagatttgc
ccctcactgctgataaagaaggatcgtgggcgccctactaacccaaaggcaagaccaaaa
gcgtatggagaagtcaacgtactcagcaatgttcctggtgttgaactgctagaagaggat
gatggcaatgaggatggtgatgatgctgatgaagcttcattaagcggcactgatgatgat
cttgatcacgatgagatggttgcttccagtgatgatgaagacaaccatatagctaacagt
gacagtggaagtgaagaggattccgtagtagctgaagatgtagatagtgatggtagtata
gatgacaacgacagtgatgtcagtggtgatgaggatgatgaagaggatgaggatgatgaa
gacgaagaggatgaggagaatgaatccaacaacaatgatgccaaagatagtggaactgga
gtaaaagataacaaagcaaaaaagaggaaggttgcagattttgataaacaacttactgat
gctgatgcaagtcttcgtgctttaaaaagattggccaaagagaacatggagcacacttca
ttggactcaacagattgttttctttctaatgaggacttccagaggattaaggaattaaag
gcaaagaaggatgccagatttgctttgactcagcatggattgttgaaaaagggtgcagat
tccaaatcgccagcattcaagattcccaattcggatgaactgagcattaagcgagtagat
ccagcaaagcttgaagtccacgtgaagaaaaggatgagcaaggaggagagattggcattg
gtgagagcagggagggaggacagagggaagtaccaggctcgagctgctataaagcagaag
aagacgggtggtatgagcaatcggcagaaggaacacaagaaacccatgcctcttgctgca
aagagggcaaaggtagctaaatctcgtatagataaaaagaaaaagcagcagcgggctggc
aaacaattccgagggaagaaagcatggaaatga
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