Prunus mume (Japanese apricot): 103321900
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Entry
103321900 CDS
T03196
Name
(RefSeq) two-component response regulator ARR11
KO
K14491
GARP family transcription factor, ARR-B subfamily
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
103321900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmum03000
]
103321900
Transcription factors [BR:
pmum03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
103321900
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Gene cluster
GFIT
Motif
Pfam:
Response_reg
Myb_DNA-binding
Motif
Other DBs
NCBI-GeneID:
103321900
NCBI-ProteinID:
XP_008221977
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Position
LG2:19477181..19481688
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AA seq
616 aa
AA seq
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MDSSFSSPRNDSFPAGLRVLVVDDDPTWLKILEKMLKKCSYEVTTCGLARDALNLLREKK
DGYDIVVSDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPI
RMKELRNIWQHVFRKKIHEIRDIESHESIEGIQLIRNGSDQYDEGYFFSAEDLASSRKRK
DVDSKYDDKDFSDCSSTKKARVVWSVDLHQKFVKAVHQIGFDKVGPKKILDLMNVPWLTR
ENVASHLQKYRLYLSRLQKENDIKSSFGGTKHSDYSSKDLQGILSVQNSINIQQNDVAHG
SYRFSGNNLVAQNADPKSNEGDIKGIVSEPVAEPKKGTTGNIPDSQKTRSSQMDFNSSYA
ETKKGLVGNVPDSQKIRSSQMRVNHSFASVESEVNLTAFDSTIPATYSWNQIQLEKEHKP
LIQLNNGFSKPLLPGPQHHFQADQLQSIPSISSRPSIPGGDVTGSSKSKPSYSEYTNHHG
SRVSPTISPTISATDSFPGQTKSCVVDHQVSETISTSTSNMKNQGINLSTDLESAHRNLI
LGSTSPFASLDDEFQICWYQGDCYGMNLELQNVEFSEYTDPTHVTEVPAHLYDALRFEYP
CDPSEYSVLDQGLFIA
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atggatagtagcttctcttctcctcgaaacgattcgtttccggctggcctccgagttctc
gtcgtcgatgatgatccaacttggcttaagatcttagagaagatgctcaagaagtgctcc
tatgaagtgactacatgtggtttggcaagagatgctttaaacttgcttcgtgaaaagaaa
gatggatatgacattgtagtcagtgatgtgaacatgcctgacatggatggttttaaactt
ctcgagcatgttggacttgagatggatcttcctgttatcatgatgtctgttgatggagaa
acgagtagggtaatgaaaggtgttcagcacggagcatgtgattatcttcttaagccaata
agaatgaaagaactgcgtaatatatggcagcatgtattcagaaagaagatacatgagatc
agagacattgagagtcacgaaagcattgaaggtattcagctgataagaaatggatcagat
cagtatgatgagggatacttttttagtgcagaagacctcgcttcatcgagaaaaagaaag
gatgttgatagtaaatatgatgacaaagacttttctgattgttcatccaccaaaaaagct
agagttgtttggtctgtagaccttcatcagaaatttgtaaaagcagtacatcagattgga
tttgacaaagttggtccgaagaagatacttgacctgatgaacgtgccttggttgacaaga
gaaaatgttgctagccacttgcagaagtaccggctctacttgagtaggctgcaaaaagaa
aatgatattaaatcttcttttggtgggacaaagcattctgattattcctcaaaagatctt
caaggaattcttagcgttcagaactcgatcaacatccaacaaaatgatgttgcacatgga
agctacagattttctggcaataatttagttgctcagaatgcggatccaaagagcaatgaa
ggagatataaaggggattgtttcagagcctgtagcagaacctaagaaaggaacgactggc
aatattcctgattctcagaagacgaggagttcacaaatggacttcaatagttcttatgca
gaaaccaaaaaaggtttggttggaaacgttcctgattctcagaagatcaggagttcacag
atgcgcgtcaatcattcttttgcatcagtggaatctgaagtaaacttgacagcatttgat
tccaccatcccagcgacgtattcttggaatcaaattcaattggaaaaagagcacaagcca
cttattcagttaaacaatggcttcagcaagcctctgctgcctggtccacagcaccatttc
caagctgatcaactacaatcaattccttccattagctcaagaccttcaatcccaggggga
gatgtaactggctccagtaagagtaagccttcatattcggagtacacaaaccatcatggt
agccgtgtaagtccaacaataagtccaacaataagtgcaacagactcttttcctggtcaa
accaagagctgtgtggtagaccatcaagtttctgagaccatttccactagtacatcaaac
atgaaaaatcagggcatcaacctgagtactgatttggaatctgcccatagaaacctaatc
ttgggaagtacatcaccttttgcttctttggacgatgagtttcagatttgctggtatcaa
ggtgattgttatggtatgaatcttgaacttcaaaatgtagagttctcggagtatactgat
cctactcatgttactgaagttcctgctcacctgtatgatgcactgagatttgaatatcca
tgtgacccatcagaatattctgtcctagatcaaggtctgttcattgcatga
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