Prunus mume (Japanese apricot): 103322023
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Entry
103322023 CDS
T03196
Name
(RefSeq) RRP12-like protein
KO
K14794
ribosomal RNA-processing protein 12
Organism
pmum
Prunus mume (Japanese apricot)
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pmum03009
]
103322023
Ribosome biogenesis [BR:
pmum03009
]
Eukaryotic type
90S particles
Other 90S particles
103322023
Pre-60S particles
Other pre-60S particles
103322023
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP12_HEAT
Motif
Other DBs
NCBI-GeneID:
103322023
NCBI-ProteinID:
XP_008222099
LinkDB
All DBs
Position
LG2:complement(20351319..20364204)
Genome browser
AA seq
1170 aa
AA seq
DB search
MDEERHQDLDAEAIEPFNDGADICQQLMDRYAKSSASQHRHLLATAAAMRSILAAESLPL
TPPAYFAATISAIDDMSSSASQNLDPTGVAALLSFLAMVLPLMPPRSVSSGKAGEAVSML
IELLEREEGLAMSSVRALIKCLGVLVRFCDLENWGSIKLGLETLLKFSVDRRPKVRKCSQ
DCLESVFKSLHSRAVIKEVSKLVLSKLKGYMPLAVELSSRTKNGPKNLEVLHMLNVVKLT
VPFLSAKVSSKLLSEMNKLVGSRFSALTRHVLQIIEALFKTSRVNVIVSETEEAIASLAS
FVSKGDKNPLDTVMSAATLLKSSVFILHTGESTLWINNLPLVCGSVAGLLTSEASTAAHA
SGILQELISQFVDQRSLLVAESQCSEDGGHETMKASALISICTIFEDALSTCKGLPNEHL
LDVISALFLKLGGISYIYMKSILLNLANLMTLASGDTSNTDHLQKCIGTAVIAMGPERIL
ELLPISLNASDFTCLNIWLIPILKNYVVGASLGYYLEHIMPLAKSFCRASTKVKKSITSQ
DLQAHARDLLGLLPAFCNLPTDICQKFGSLAEVLVTFLKDSLMHENIAVALQVLVNQNKR
VLDQKDGGGETNSYDVNEMLPKFEHIPTYSKKTATRNIRALTSCSAELLQALTDLFLDSP
PGKRSYLKDAIGCLASVTDSSISKKIFESLLEKFQFKDGGDEFGKVESHTDASSGEEQRN
LSTREKDAQRCVIMELASSLVKGAKEDLINLIYTFAKDTLQNDDEVANREAYHALSRILE
EHTWFCSSQFAELIDLLLCLRSPVDIHSLKSRFACFQTLMIHTLKVDSEVENSKSFLILN
EIIVTLKDAKDEAVREAAYDILHKMSVRLRDTSCVSSDGPYQKLINMIMGYLSGGSPHIK
SGAVSVLSVLMYKDTDICLSMPDLVPSLLSLLQGKALEVIKAVLGFVKVLVSCLQARRLQ
NLLPDIVNAVLPWSPVSRHHFKSKVTIIMEILLRKCGTAAVQLVTPDKYKNFVKGILESR
HNKKSSNEIATTDIDTSHEDSSTKRMEDRKRKGFGMQPEKNGSMENRTRKRAKKHMPSDP
RTNELHMSSWGGLKRAGRGRQSDGVKSVKDQPERSGKTNKENYNKGPKSGRKRKIDETNM
SEDAAGRQRPGTNSNKSIKLFKHKKVGRKQ
NT seq
3513 nt
NT seq
+upstream
nt +downstream
nt
atggacgaagaacgccaccaagacctagacgcagaagcaatagagccattcaacgatggc
gcagacatctgccagcagctcatggaccgttacgccaagtcctcggcttcgcagcaccgc
cacctcctcgccactgccgccgcaatgcgctcaatccttgccgccgagtcgcttcccctc
actccaccggcttatttcgccgccaccatctccgccatcgacgacatgtcgtcttccgcg
tcccagaacctggaccccaccggcgtagcggcgctgttgtcttttctagccatggtgctc
ccgctgatgcctccacggagcgtctcgtcagggaaggcgggtgaggccgtatcgatgttg
attgagcttctggagagagaggaggggctggccatgtccagcgtgagggctttgataaaa
tgtttgggggttttggtgaggttttgtgatttggagaattggggatccatcaaattgggt
ttggagacattgctcaagttctccgtcgataggcgacccaaggtccgtaaatgttcccaa
gattgtcttgagagtgtttttaagtcgctccactctcgtgctgttatcaaggaggtgagc
aagctggtactgtctaagctcaaaggttacatgcctttagcagttgaattaagttcacgg
actaaaaatggacctaaaaatctagaggtccttcacatgctaaatgtggtgaagcttact
gttccctttctctcagcaaaagtcagttcaaaacttctttcagaaatgaataagcttgtt
ggttcacggttctcagcactcacaaggcacgttctccaaattattgaagcattatttaag
acctcaagagttaatgtgattgtttcagagacagaggaggctatagcttctcttgcttca
tttgtgtctaagggagataagaaccccttggacactgtcatgtctgcagcaaccttacta
aaatcttctgtgttcatacttcatactggtgaatcaacattgtggattaataatcttcct
ctagtatgtggttctgtggcgggtcttttgacttctgaggctagcactgcagcacatgct
tcaggtattttgcaagagctgataagccaatttgtggatcaaagaagtttgctggtggct
gaaagccaatgttctgaagatggaggacatgagactatgaaagcaagtgcattaatatca
atatgcactatttttgaggatgcccttagcacttgtaaaggattgccaaatgagcatctt
ttggatgttatatctgctctgttcctcaagctcggaggaatctcctatatctatatgaaa
agtattcttctcaaccttgccaatttaatgacccttgctagtggggacacatctaacact
gatcatcttcagaaatgtattggaactgcagtaatagctatgggaccagagaggattctt
gaacttttgcccatctctcttaatgctagcgacttcacctgtttaaacatttggttgata
cctattttgaagaattatgttgttggagcatcattgggttactatttggagcatatcatg
cctcttgcgaaatccttttgtcgggccagtactaaagttaaaaagtcaataaccagtcaa
gatctacaggctcatgcacgtgatctgttgggattgctacctgctttctgtaatcttcca
actgatatatgccaaaagtttggatctttggctgaggttttagtgacatttctgaaggac
tccttaatgcatgaaaatattgcagttgccttgcaggttcttgtgaatcagaacaaaaga
gtacttgaccaaaaagatggtggtggtgagacaaattcctatgatgtgaacgaaatgttg
ccaaagtttgaacacatacccacttattcaaagaaaactgctaccagaaatattagggct
ttgacatcatgttctgctgagttgcttcaggcactaacagacttatttcttgattcaccg
cctgggaagcgttcatatctaaaggatgccataggatgcttggcttcagtaactgattcg
tccatttccaagaagattttcgaatcattgctcgagaagttccagttcaaagatggtggg
gatgaatttggaaaggtggagagtcatacggatgcatcatctggtgaagaacaacgcaac
ctgagtactagagagaaagatgctcagagatgtgtgataatggaattagcatcttctctt
gttaaaggagccaaggaggatctcatcaatctaatctatacgtttgctaaagatacttta
cagaatgatgacgaggtagcgaatcgtgaagcataccatgctttgagcagaattctagag
gagcatacttggttctgttcttcccaatttgctgagttgattgatctgttactttgtttg
agatctcctgttgatatccattctctaaagagtcgtttcgcttgtttccagactttaatg
attcatactttgaaggtagactcagaggtggaaaattcaaagtcgtttcttattctcaat
gaaatcatagtaacgttaaaggatgccaaggatgaagcagttagggaagcagcgtatgat
atactccacaaaatgagtgttcgcttgagagacacatcatgtgtcagttcagatggacct
taccagaagctaattaacatgataatgggctatctttccggtggatcacctcacataaag
agtggagcagtgtctgtgctatcagtgctgatgtataaggatacagatatttgtctttcg
atgcctgatcttgttccctctcttttatctttgctgcaaggaaaagctctagaagttata
aaagctgttttgggctttgtgaaagtactagtatcttgcttacaagctagacgtctgcaa
aatcttcttcctgatatcgtcaatgcagttctcccatggtcacctgtctcgagacatcat
ttcaaatcaaaggtcacaatcataatggagattctgttaaggaagtgtggtactgcagca
gttcagttagttacgccagataaatacaagaattttgtcaagggtattttggagagccgc
cataacaagaaaagttccaacgaaattgccacaaccgatatagatacaagtcatgaagat
tcttcaaccaaaaggatggaggatagaaaacgcaagggatttggtatgcaacctgaaaag
aatggatcaatggaaaatagaacgagaaaaagggcgaagaaacacatgcccagcgaccct
agaacgaatgagcttcatatgtcttcttggggtggactgaagcgtgctgggagaggtagg
caatctgatggtgtaaaatcagttaaggaccagccagaaagaagtggaaagacaaacaaa
gagaattataataaagggcccaaaagtggtcgcaagaggaagatagatgaaacaaatatg
agcgaggatgcagctgggaggcagagacctggcactaatagtaataaatccatcaaatta
ttcaagcacaaaaaggttgggagaaaacagtag
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integrated database retrieval system