Prunus mume (Japanese apricot): 103322110
Help
Entry
103322110 CDS
T03196
Name
(RefSeq) uncharacterized protein LOC103322110 isoform X1
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
pmum
Prunus mume (Japanese apricot)
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmum03019
]
103322110
Messenger RNA biogenesis [BR:
pmum03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
103322110
Surveillance factors
Other surveillance factors
103322110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
Motif
Other DBs
NCBI-GeneID:
103322110
NCBI-ProteinID:
XP_008222213
LinkDB
All DBs
Position
LG2:complement(21122339..21130011)
Genome browser
AA seq
1611 aa
AA seq
DB search
MAEGKLDLPDDLLSSKPSDQSWTCKVEASGGNDEEKVLIGSSDDSKDPAASESSIPLSPQ
WLYAKPSESKLEMRGQSSLGNSTDSNQKEGWRLEGSDDKKDWRRPASESENSRRWREEER
ETSLLGGRRDRRKPERRVDSVPVRDTTDNRALPASERWHDGRNSVHEVRRDSKWSSRWGP
EDKEKEPRTEKRTDVEKEDAHTNNDNQSLGGNNRSAPERESDSRDKWRPRHRMEVHSGGS
NTYRAAPGFGPERGRVEGSNLGFTLGRGRSNAIGRSSAGVIGSAPSGKSESVPGKPRHSA
DSFCYPRAKLLDIYRQRKLDLSFATMPDEMEESPPTTEVGFVEPLAFLAPDAEEEAILSD
IWKGKITSSGVVYNSFRKGRSTESSTGVGDLEAVDGVLGILPSNIPEESINTLQEAASAD
TNGSLWNYGPQRNVVDEKDVNHKEWQNKATAGKDLDGLSLKFQKSNGICSDFESDGAYNS
ADQLHVRDSRQIADSTFSSHSLSDDIEFTPSSDIRSKLPDDSNTLYALGSSEQMQSTNPR
AKEVERDVPPEDLCLYYLDPQGVIQGPYLGVDIISWFEQGFFGTDLLVRLADTPEGTPFN
ELGEFMPHLKVWDGQGNIMNPSSNIEESSGLIGNLESSLPSSAPVSEITDSFMGNDLRRP
LPELDSLSAQHILPRTSEPEAPLQLPNSRGQSFNEFVADDEDIVFPGIPGTTGHSSAKSS
GTIHDPIANSISHLPPTELTESGMPIQNDNKLHPFGLLWSELEGGQTKHIKSANTPSGAG
RAVPFGAISDPAVVAETWPDVHRKNTVSDTNLYQDMIAPRQLAHMEQEPSHYDLAEQLMS
QQIQQQQLQQRNMLSSFGHLNDAVLEHLPNQNLIHQQLANHSSADMDHLLALQMQQHRQA
QLQQHHQLQQQQFHQQQKLLQEQQQSQVQQVLLEQLLRGQMHDPALRQQHVDPVRANNVL
DQVLLEQHLLHELQQRSHHLPRHVDPSMEQLIQKFGHSPQGHQTDLFELLSRAQHGQIQS
LEHQMQARQQLPIGMRQRMEEERHVNSVWPADESNQFLRGHAGTQQRAHSSGFSPLDFYQ
RQQRPSHEEQLSHLDRNHSLQDRLQQGFYEPGSLPFERSMSLPAGAPGMNLDVVNAMARA
QGLDMQDSAGRMQSAGQLGTFSSGIHSHNPHHPLPNQFHVSHLDALEGHWSEKNEQLEND
WLDSRFQQLHINAERQKRESEIKIPSQDRTLWMSDGSNEEHSKRLLMELLHKKSGHQPTE
SSNVSNDMFSDKRLSSGLYSGSSSSNHPFILHADQEAGLNNSFRVGSYGSNPCELPQEER
ACSVESNEKLMYRPDSGALIERESFLAGINATTQSIYTNSNMISKSSINKERSELEGRKR
GSKSEAIIMGRAFETQERMAEQAGLAAQDYGERATNALGMHNLSGVSGGNAGFYGDKIGR
SNSFAEETTKDRVPVPSKGQDNILLRRPAVSNASASQEGLSELISNPVFRGKNSSGAPDG
GRPDQVVNPVNQGSDVISSSKKEVHFRRALSVSDADVSEASFMDMLKSNTKKVGPMDAHT
AAGFSEASDAMQGSRSGKKKGKKGRQIDPALLGFKVTSNRIMMGEIQRIDD
NT seq
4836 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaggcaagctcgatctgcctgacgatctcctctcgtccaaaccgtccgatcag
tcctggacctgcaaagttgaagcctctggaggaaatgatgaagaaaaggtgcttatcggg
tcatctgatgactcaaaagatccagcagcctcagaaagcagcatacctttgtccccccaa
tggctgtatgccaaacctagtgagtctaagttggaaatgcgcggccaaagttcactcgga
aactccactgatagcaaccagaaggaaggttggcgtttggaaggatctgatgacaaaaaa
gattggaggcggcctgcctctgaaagtgaaaatagccgtcgttggcgtgaagaggaaaga
gaaactagcttgcttggtggtagaagagatcgcaggaaaccagaacgccgtgttgacagt
gttccagttagagacacaactgacaatagggcattgcctgcatcggaaaggtggcatgat
ggccgtaattctgtgcatgaagtgcggcgtgatagcaaatggtcgtcgaggtggggtcct
gaagacaaagaaaaggagcctcgaactgagaagagaacagatgtagagaaggaagatgct
cacactaacaatgacaatcaatcccttggaggtaacaatcgttcagctcctgagcgcgag
tcagattctcgggacaaatggaggccacgccatagaatggaggttcactctggtgggtca
aatacttaccgtgctgcacctggatttggacctgaaagaggacgggtggagggttcaaat
ttgggatttacccttggaagagggaggtcaaatgccatcgggagatcatctgcaggcgtt
attggctctgctccttcaggaaaaagtgaaagtgtcccagggaaacctaggcactcagct
gatagtttttgctaccctagggcaaagcttcttgacatttatcgtcagagaaagcttgat
ctatcttttgctaccatgccagatgagatggaggaatcaccccctacaactgaagtagga
tttgttgaaccactggcttttcttgccccagatgctgaagaagaggccatccttagtgat
atatggaagggaaagattacaagtagtggggtagtatacaattcttttagaaaggggcga
tcaactgagagcagtacaggtgttggggacttggaagctgttgatggagttctgggtatt
ttgccctcaaacatccctgaagagtctatcaataccttgcaggaggctgcaagtgctgat
actaatgggagtttgtggaattatggtccacagaggaatgtggtagatgaaaaagatgtc
aatcataaagaatggcaaaacaaagctactgcaggaaaggaccttgatggattgtcccta
aaatttcaaaaaagtaatggtatctgcagtgattttgagagtgatggtgcttacaatagt
gccgatcagctccatgttcgtgacagtaggcaaattgcagattctactttttccagtcat
tctctctctgatgacattgagtttaccccttcttctgacataagatccaaacttcccgat
gattcaaatactctctatgctttaggctcttctgagcagatgcagagtaccaaccctcgg
gcaaaagaagtagaaagggatgtccctcccgaggacttatgtttgtattaccttgatcct
caaggggttattcagggaccatacctgggggtagacattatttcatggtttgaacaaggt
tttttcgggacagacttgcttgttcgtttggcggatactcctgaaggaacacctttcaac
gaattgggggagttcatgccacatctgaaagtttgggatgggcaagggaatatcatgaat
ccaagttctaatatagaagaatccagtggcttgatagggaacttagagtccagtttaccg
tcttctgctccggtttcagaaattactgattcatttatggggaatgaccttcggcggcca
ttgcctgaactagacagcctttcagctcagcatattctacccagaacatctgagcctgaa
gccccattacaactgccaaattccaggggtcaaagctttaatgaatttgttgcagatgat
gaagatattgtgtttccaggaatacctggaaccaccggccattcttctgcaaaatcttcg
gggaccattcatgatcctatagctaattctattagccaccttcctccaactgagctgact
gaatctggtatgcctattcagaatgataataagttgcacccctttggcttgctatggtct
gaactagaaggtggtcaaacaaaacatatcaagtcagccaatacgccttctggtgcaggg
agggcggttccatttggtgcaatttctgatccagcagttgttgccgagacgtggcctgat
gttcacagaaaaaatacagtctctgatacaaacctgtatcaagacatgatagctcctcgg
caattggcacacatggaacaggaacccagtcattatgatttagcagagcagctcatgtca
cagcaaattcaacagcaacagctccagcagcgaaatatgttgtctagttttgggcacttg
aatgatgcagtattagagcatttgccaaatcagaatcttattcaccaacagttagccaac
cattcttctgccgacatggatcatctattggcacttcagatgcaacagcatcgacaggct
cagctccagcaacatcatcaattgcagcagcagcaatttcatcaacagcagaagctttta
caggagcaacagcaatctcaagtacaacaggtgcttcttgaacaactgctgcgtggtcaa
atgcatgatcctgcacttaggcagcaacatgttgatcctgtcagagcaaacaatgttctt
gatcaggttctattggagcagcaccttctgcatgagcttcaacaacggtctcaccatctt
ccaaggcatgttgatccatctatggaacagcttatccagaagtttggtcactcaccgcaa
ggacatcaaacagatttgtttgagctactgtctcgtgcgcagcatgggcaaattcaatcg
ttggaacatcagatgcaagccaggcagcagttaccaataggaatgaggcagaggatggaa
gaagagaggcatgtcaattctgtctggccagcagatgaatcaaatcagtttttgaggggc
catgctggtactcagcagcgagctcactcttctggatttagtcctttggatttttaccag
aggcaacagaggccatcccatgaggagcagctgagtcaccttgaccggaatcattcattg
caggatcgacttcagcaagggttttatgagcctggctcactgccgtttgagcggtcaatg
tcattgcctgctggtgcaccagggatgaacttggatgttgtaaatgctatggctcgtgct
cagggtttggatatgcaggattccgctggacgtatgcaatcggctggtcaattgggaaca
ttttcgtctggcatccattctcataatcctcatcaccctcttcctaaccaatttcatgtc
tcacatttggatgcacttgagggacactggtctgagaagaatgaacagctagaaaatgac
tggctggactctcggtttcaacagctgcatattaatgctgagcggcagaaaagggagtca
gaaatcaaaattccttctcaggatcgaactttatggatgtcagatggatctaatgaagag
cattcaaagagactattgatggagttactccataaaaaatcgggccatcaacctactgag
tcatcgaatgtcagcaatgatatgttctctgataaaaggctgtcatctggcctctactct
ggatcaagctcttcaaatcacccattcattcttcacgcagaccaagaagcaggtctaaat
aattcatttcgagtaggatcctatggttctaatccatgtgaacttccacaggaagagcga
gcctgcagtgtggaaagcaatgaaaaattgatgtatagacctgattctggagcattgatt
gagagagagtcattcttggcaggcatcaatgctacgactcagtcaatttacacaaattct
aacatgattagtaagtcttctatcaataaagaacgttcggagttggaggggaggaagcgt
ggatccaagagtgaggcgatcattatgggtcgagcttttgagactcaagaacgaatggct
gaacaagcagggttggctgcccaagattatggggagagggcaacaaatgcccttggcatg
cataatttatctggtgtttcaggtgggaatgcaggcttttacggcgacaagattggccga
agtaattcatttgcagaagaaactaccaaggatcgggtgccggtcccatccaaaggtcaa
gacaatattctgctgagacgacctgctgtatcaaatgcttcagcatcccaagaaggattg
tcagaactgatttccaatccagttttcagagggaaaaattcaagtggtgctccagatggg
gggaggccagaccaagtcgttaatcctgtaaaccaaggttctgacgtcatttcatcttca
aagaaagaagtgcattttcgccgtgctttatccgtcagtgacgctgatgtgtcagaggcg
tcatttatggatatgcttaagagtaataccaagaaggttggtccgatggatgcccatacg
gcagcaggattttcagaagcatccgatgcaatgcaagggagccgaagtggcaaaaagaag
ggaaagaaagggaggcaaattgaccccgcactccttggttttaaagttaccagcaaccgg
ataatgatgggtgaaattcaacgcatagacgattag
DBGET
integrated database retrieval system
