Prunus mume (Japanese apricot): 103322116
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Entry
103322116 CDS
T03196
Name
(RefSeq) E3 ubiquitin-protein ligase RING1-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
pmum
Prunus mume (Japanese apricot)
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmum04131
]
103322116
04121 Ubiquitin system [BR:
pmum04121
]
103322116
Enzymes [BR:
pmum01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
103322116
Membrane trafficking [BR:
pmum04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
103322116
Ubiquitin system [BR:
pmum04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
103322116
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1117
zinc_ribbon_9
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-C3HC4_3
zf-RING_5
zf-ANAPC11
zf-RING-like
zf-RING_16
Rad50_zn_hook
Prok-RING_4
DpnI
CxC4
Motif
Other DBs
NCBI-GeneID:
103322116
NCBI-ProteinID:
XP_008222223
LinkDB
All DBs
Position
LG1:4234222..4235880
Genome browser
AA seq
363 aa
AA seq
DB search
MATSSPSPTTSYWCYRCTRFVRVWVQDSTLSCPHCETGFLEEIETTPHPPPPPIHHHRRF
PSSHVHDQNPAPTSRRVRRAPVDRSSPFNPVIVLRGGAESNTESNSFELYYDDAAGSGLQ
PLPPTMSEILMGSGFDRLLDQLSQIEITGLGRPENPPASKSAVDSMPVVQIGETHVVSDA
HCAVCKEAFELGSEAREMPCKHIYHSDCILPWLAMRNSCPVCRHELPADRNDRTSDPGLD
EETMGLTIWRLPGGGFAVGRFSGGRRPGERELPVVYTEMDGPFNGNGAPRRVLWSSRSRG
SESRGIRRAFRNLASFWGRFRSNSSSSRSGSESGSVFSRSQSHSSSVFGRFVQRRSRAWV
LDD
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atggccacgtcatcgccgtcgccgacgacgtcgtattggtgctacagatgcactcgcttc
gtccgtgtctgggtccaggactctaccctctcatgcccccactgcgaaaccggttttctg
gaagagatcgaaacgacgccgcacccaccgccaccgccgatccatcaccaccgtcgattc
ccgtcctcccacgtccatgatcaaaacccggccccgacttcccgccgagtccgtcgggcc
cccgtagaccggtcctcccccttcaacccggttattgtcctacgtggcggggccgagtca
aatactgagtccaactcgttcgagctttactacgacgacgctgccgggtcggggctccag
cccctcccgcccaccatgtcggagatcttaatgggctcgggcttcgaccggttgctcgac
cagctctcccagattgaaatcaccgggctgggccgacccgaaaatccgcccgcgtctaaa
tcagccgtggactctatgcccgttgttcaaatcggcgaaacacacgtcgtgtcggatgcg
cactgcgcggtctgcaaggaagcattcgaactcgggtcggaggcccgagaaatgccgtgc
aagcacatataccactcggattgcatcctcccctggcttgctatgcgaaactcgtgcccg
gtttgccggcacgagctgcccgccgaccgaaatgaccgaacttcggatccgggtctcgac
gaagagacgatggggctgaccatctggagattacccggcggtgggttcgctgtggggaga
ttctccgggggcagacgacctggagagagggaattgccggttgtgtacacggaaatggat
ggcccattcaacgggaacggggctccgagaagggtactatggtcatcgagaagtagagga
agtgagagtcgtgggattcgcagggctttccgtaatctggcgtcgttttggggtcggttt
aggtccaattcgtcttcttcgaggtccgggtccgaatccgggtcggttttcagcagaagt
cagagtcactcaagttcggtgtttggccggttcgtccagaggcgcagcagggcttgggtg
ttggatgattaa
DBGET
integrated database retrieval system
