KEGG   Prunus mume (Japanese apricot): 103322208
Entry
103322208         CDS       T03196                                 
Name
(RefSeq) chromatin structure-remodeling complex protein BSH
  KO
K11648  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
pmum  Prunus mume (Japanese apricot)
Pathway
pmum03082  ATP-dependent chromatin remodeling
pmum03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:pmum00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    103322208
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    103322208
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:pmum01009]
    103322208
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pmum03021]
    103322208
   03036 Chromosome and associated proteins [BR:pmum03036]
    103322208
Protein phosphatases and associated proteins [BR:pmum01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     103322208
Transcription machinery [BR:pmum03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     103322208
    SWI/SNF complex
     103322208
Chromosome and associated proteins [BR:pmum03036]
 Eukaryotic type
  Chromatin remodeling factors
   BAF complex
    103322208
   PBAF complex
    103322208
   SWI/SNF complex
    103322208
SSDB
Motif
Pfam: SNF5
Other DBs
NCBI-GeneID: 103322208
NCBI-ProteinID: XP_008222322
LinkDB
Position
LG2:21926980..21930979
AA seq 242 aa
MKGQASSSYKGAVKFRMPTAQNLVPIRLDLDVDGQKFKDTFTWNPSDPDSEIVVFARRTA
KDLKLPPGFITVMASAIQSQIADFRSLEGQDMYPGERIVPIKLDLRVNHTLIRDQFLWDL
NNFESDPEEFAKTFCADLGIQDPEVGPAIAFSIREQLYEIAVQSVASARENRISKKGRRG
AEYTPVSKAGSTGLDLVKLFGHKSSVVRKRKEWDVYEPIVDLLSSEEVDALQAKEERLTR
TI
NT seq 729 nt   +upstreamnt  +downstreamnt
atgaaaggtcaggcgtcgagttcctacaaaggcgctgtcaagttcaggatgccaacagcc
cagaatttagtaccgattcgcttggacctcgatgtcgatggccaaaagttcaaagacact
ttcacttggaacccatctgaccctgactccgagattgtggtgtttgcgagaaggacagca
aaagacttgaagcttcctccgggtttcattacagtcatggcttctgccattcagtcacag
attgcagactttcggtcgttggaaggccaagatatgtacccgggcgagaggattgtgcca
attaagcttgatcttcgagtgaaccatactcttattagggaccagtttttatgggacttg
aacaactttgaaagtgatcctgaagagtttgctaaaacattctgcgcagatttaggtatt
caagatcctgaagtggggcctgcaattgccttttcaattagggaacaactgtatgagatt
gcagttcaaagtgtagcatcagcaagagaaaacagaataagcaaaaagggacgccgaggg
gctgagtatactccagtcagtaaagcaggtagtactggattggacctggtgaagttattc
ggtcacaaatctagtgttgttcggaaaaggaaggagtgggatgtatacgaacccattgtt
gatcttctatctagcgaggaagtggatgcccttcaagcaaaagaagaaaggcttactcgg
acaatttga

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