Prunus mume (Japanese apricot): 103322370
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Entry
103322370 CDS
T03196
Name
(RefSeq) eukaryotic translation initiation factor 2A
KO
K15026
translation initiation factor 2A
Organism
pmum
Prunus mume (Japanese apricot)
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmum03019
]
103322370
03012 Translation factors [BR:
pmum03012
]
103322370
Messenger RNA biogenesis [BR:
pmum03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
103322370
Translation factors [BR:
pmum03012
]
Eukaryotic type
Initiation factors
eIF-2A
103322370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eIF2A
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
ANAPC4_WD40
WD40_Prp19
WDR55
B-prop_COPA_B_2nd
Motif
Other DBs
NCBI-GeneID:
103322370
NCBI-ProteinID:
XP_008222503
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Position
LG2:24352890..24358412
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AA seq
517 aa
AA seq
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MAASETAPPLDILVRGPEGFSLWNGPPFSNGQPGIKLENISCTSTKFSEDGSRLMVMKSD
SVISIYDCSSYREIRSFQIPNVAAAALSPRGTYLQTFQKSSTPQEKNVILWNTETGDPVY
QQFQKNMTKATWPSIRFSSDEAVACRLATNEIQFLDAGDFSKPFIYRLRVPGVAAFELSK
APGSHVAAFVPESKGIPASVQIFSCAKAVQSQPLARRSFFRCSSVQLHWNNGSTGLLVVV
QSDVDKTNQSYYGESKLNYLTTDGTHEGLVPLRKEGPVHDVQWAYSGSEFAVVYGFMPSK
ATVFDKKCNPLLELGTGPYNTIRWNPKGKFLCLAGFGNLPGDMAFWDYVEKKQLGTTRAE
LSVTSEWSPDGCYFMTATTAPRLQVDNGIKIFHHNGSLFFKKMFDKLYQADWKPESPDRF
GDIAELVKSIGSLKVVETKPQGDRSKISQTSAKASASNPPAQKPAAYRPPHAKSAAAVQA
QLFGESSTETVSKNALKNKKKREKQKEKKAAEATSGT
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atggcagcctctgaaactgccccgcctctggatatcttagttcgtggcccagaagggttc
tcgctctggaatgggcccccatttagcaatgggcaacctggtatcaagcttgaaaacatt
tcctgcacaagtacaaaattcagtgaagatggatcgaggctgatggtgatgaaatctgat
tcagtaattagcatatatgattgcagcagctatagggagatcagatcttttcaaatcccc
aatgttgctgcagctgccttgtccccacgtgggacttatctgcaaacttttcagaaatca
tcaacgccacaggagaagaatgtcatcttatggaacactgagactggtgatcctgtttat
caacaattccaaaagaacatgacaaaagctacatggccctcaattagattcagctctgat
gaagctgttgcatgtcgactggcaacaaatgagatacaatttttggatgctggagatttc
tctaaaccatttatatatcggctaagagttcctggagtggctgcatttgagctttctaag
gcaccgggctcccatgtggcagcatttgttccagaatccaaggggattcctgccagtgtc
cagatattttcttgtgcaaaagctgtacagagtcaacctcttgctcgacggagtttcttc
cgatgttcatcagtgcaactgcattggaataatggctcaaccgggcttttagttgtggta
cagtcagatgttgataaaaccaatcagagttactatggggaatcaaagctcaactacttg
acaacagatgggactcatgaaggacttgtacctcttcgtaaagaggggcctgttcatgat
gttcagtgggcatattctggatcggaatttgctgtagtttatggctttatgccttcaaaa
gcgactgtgtttgacaagaagtgcaatcctcttcttgagcttggaacgggtccgtacaat
actatccgatggaatccaaagggaaaatttctgtgtttggcaggctttggtaacttacct
ggtgatatggcattttgggactatgtggagaaaaaacagcttgggacaactagggctgaa
ttgtctgtgacaagcgaatggtctccagatggatgctatttcatgactgcgacaactgca
ccaagacttcaagtcgacaatgggattaagattttccaccacaacgggtcattattcttc
aagaagatgtttgacaagttgtaccaggctgattggaaaccagagtcaccagataggttt
ggtgacattgccgaacttgtcaagtccataggatcattaaaagttgtcgaaacaaaacct
caaggagacaggtccaaaatttctcagacctctgcaaaagctagcgctagcaaccctcct
gcccaaaagcctgctgcttatcggcccccacatgctaagagtgctgctgctgttcaggct
cagctgtttggagagagctctacagagacggtgagcaagaatgcattgaaaaacaagaag
aaaagggagaagcaaaaggagaaaaaggctgctgaggctaccagtggtacttga
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