Prunus mume (Japanese apricot): 103322520
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Entry
103322520 CDS
T03196
Name
(RefSeq) transcription factor IIIB 70 kDa subunit-like
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
pmum
Prunus mume (Japanese apricot)
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmum03021
]
103322520
Transcription machinery [BR:
pmum03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
103322520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
BRF1
Zn_Ribbon_TF
DmmA-like_C
BRF2-like_C_cyclin_rpt
TipAS
DZR_2
DUF6017
DUF5816
Motif
Other DBs
NCBI-GeneID:
103322520
NCBI-ProteinID:
XP_008222669
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Position
LG2:complement(26849652..26871622)
Genome browser
AA seq
604 aa
AA seq
DB search
MPFCSHCRKKVSGINDGGRISCSGCGKVLEYDLYSEEPTFVKNAAGQSQLAGRNVRSIQS
DDSASRARIFENAEYELRCMRNALDMGENEEIVDIAKRFFRIAVDRNFTRGRKSEQVLAS
CLYIACREKRKPYLLIDFSNYLKINVYVLGAVFLQLCKVFMLDEHPIVQKPVDPSWFIHK
FTESLPGGTDKGVIQTAQRIITSMKRDWMQTGRKPSGLCGAALYISALSHGLKCSKSDII
RIVHVCDATLTKRLVEFENTESGSLTIEEFLVKARELEELSQEPNLAVKVDNTDEVLCEH
KGSAKPFQYGLCRVCYDDFMQISGGLEGGSNPPAFQRAEIKRLEEASTEENANDSGVDSM
PCQSLDNSKEILNCEKEPNNSKAESGGEGLQFTEPESVGDDTVKTGAEGGTEDCDEPDNL
SDIDDAEVDSYLLNEEGKRYKKMIWEEVNREYIEEQAAKEREAKAAGMDPNCPEDAKKVA
TAKKRKERQLARAAEARNDTEAQTAAEAVHQMLTKKRLSSKINFDALEDMFQTAEALDNS
KKKKESHPDIDAEMQHEEGLEFDAYKNDEYEDDGNEGTVGYNILDPENVDEQYDYEDYGY
GDDY
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgccgttttgttctcactgtagaaagaaagtcagtggaattaacgatggtggtagaata
tcgtgttctgggtgtgggaaggttttagagtatgacctttactctgaggaacccacattc
gttaaaaatgcggccggccagagccaattggctggaagaaatgtacgtagcattcagagt
gatgactcagcttctcgtgcaaggatattcgagaatgctgaatacgaattaagatgcatg
agaaatgctttagatatgggagaaaatgaagaaattgttgacattgctaagcgctttttt
agaattgcagtagaccggaatttcaccagggggcgtaaatcagagcaagtgctggcttcg
tgtctttacattgcatgtcgggaaaagaggaagccgtatcttcttattgatttttcaaat
tacttgaagataaatgtttatgtgctaggtgccgtgtttttgcagctttgcaaagttttt
atgcttgatgagcacccaattgttcaaaaacctgttgatccatcttggtttattcataaa
tttacagagagtttaccaggaggaacagataaaggggttatccaaactgcacagcggatt
atcactagcatgaaacgggattggatgcagacaggcagaaaacccagtgggctatgtggt
gctgcattatatatatctgcactttcacatggtctcaagtgttccaagtctgatattatc
agaattgtgcatgtttgtgatgcaacattgaccaagcggctggttgagtttgagaataca
gaatctggaagcttgacgattgaagagttccttgtaaaggcaagggagctagaagaatta
agccaagaaccaaacttggcagtaaaagttgataacacagatgaagtcctttgtgagcat
aagggtagtgcaaaaccttttcaatatggactttgtagagtttgctatgatgactttatg
caaatttcaggtggacttgagggagggtctaatcctccagctttccagcgtgccgaaata
aagagattggaggaagcatctactgaggaaaatgctaatgactctggtgttgatagcatg
ccttgtcaaagcctagacaacagtaaagagatattaaattgtgagaaagaaccgaacaat
tcaaaagcagaaagtgggggcgaaggattgcagtttacagagcctgaaagtgttggtgat
gatacggtgaaaacaggtgctgaggggggtactgaagattgtgatgaacctgacaacctt
tcggatattgatgacgcagaggttgatagctaccttctaaatgaagaggggaaacgttac
aaaaagatgatttgggaagaagtgaaccgggagtacattgaggagcaagcagctaaggag
cgagaagccaaggctgctggtatggatcccaactgtccagaagatgcaaagaaggtagcc
acagcaaagaaaagaaaggaaaggcaactagctcgagcagctgaagcaaggaatgatact
gaagctcaaactgctgcagaagctgtccaccaaatgttgactaagaagagactcagctca
aaaatcaactttgatgccttagaggacatgttccaaacagctgaggctctagataactcc
aagaaaaagaaagaatcacatcctgacattgatgctgagatgcaacatgaagaggggctt
gaattcgatgcatacaaaaatgatgaatatgaagatgatggaaatgaaggaacagttggc
tacaatattcttgatcctgaaaatgttgatgaacagtacgactatgaagattatggttat
ggtgatgactactga
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