Prunus mume (Japanese apricot): 103322535
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Entry
103322535 CDS
T03196
Name
(RefSeq) protein PAF1 homolog
KO
K15174
RNA polymerase II-associated factor 1
Organism
pmum
Prunus mume (Japanese apricot)
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmum03021
]
103322535
Transcription machinery [BR:
pmum03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
103322535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Paf1
Motif
Other DBs
NCBI-GeneID:
103322535
NCBI-ProteinID:
XP_008222683
UniProt:
A0ABM0NCF2
LinkDB
All DBs
Position
LG2:27172421..27181328
Genome browser
AA seq
684 aa
AA seq
DB search
MASYRPFPPQSSFGPPPNQNPLTPTPPPPPPQRGNQYNQNWGYNYNHSNYGPPRTQHPHP
QPQYNYPPLPPPPESSYPPPPPPQAPPVAQNKMPLQAPQAPMYYQNSQYSQYSHQPIQPL
QQPSPPPPPPFSPSSSAPPPPPPPGSPPPPPPQSKDGGVDRGSHEKGASREVSVSGRGEH
GHLNHGVPQKQHKPPVPSMQVKKANGPPGRLETEEERRLRKKREFEKQRQEEKHRQQLKD
SQNSVLQKTQMLSSGKGHGSIAGSRMGERRATPFLSGERTENRLKKPTTFVCKLKFRNEL
PDPSAQPKLMSLKKDKDQYTKYTITSLEKTYKPKLFVEPDLGIPLDLLDLSVYNPPSVRP
PLALEDEELLRDDVAATPVKKNGIRRKERPTDKGVAWLVKTQYISPISMDSARQSLTEKQ
AKELREMKGGRNILDNLNDRERQIKEIEASFEACKSRPVYATNKNLYPVEVLPLLPDFER
YEDQFVLAAFDGAPTADSEIYSKLDQSGHDAYESRAIMKSYKVTGADPANPEKFLAYMVP
SPNELSKDPYDESEDVSYSWVREYHYDVRGDDVHDPTTYLVSFDEEEARYAPLPTKLVLR
KKRSKEGKTSDEVEHFPAPSRVTVRQRSTVAAIELKDSGDYSRGSVSNLKTRRFDVEDTL
ERPRKISRHQDIDEYSGAEDDLSD
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atggcttcatataggccgttccctccccaatcgtcattcgggccgccgccaaatcaaaac
cctcttacaccaacaccaccgccacctcctccacagagaggcaatcaatataatcagaat
tggggttacaattacaatcatagtaattacggccctccaagaactcaacaccctcaccca
caaccacaatacaattatccaccactgcctccgccgcccgagtcttcgtacccaccaccg
ccgccccctcaagctcctccagtggcacaaaataaaatgcctttacaggctccacaagcc
cccatgtactatcagaattctcagtattcacaatatagtcaccaaccaatccagccttta
cagcagccatcgcctccgcccccaccacctttttccccgagttcctctgccccaccgcca
ccaccacccccgggttcaccaccaccaccccctccacaaagtaaggatggtggggtagat
agaggttcccatgaaaaaggggcttccagggaggtatcggtgtcagggaggggtgaacat
gggcatttgaatcatggggttcctcaaaaacagcataagccccctgttccttcaatgcaa
gtgaagaaagcgaatgggcctccagggagattggagacagaggaagagaggagattgaga
aagaagagggaatttgagaagcaaaggcaagaagagaagcataggcagcagctaaaggat
tcccaaaattcagttttgcaaaagacacagatgttgtcttctgggaaaggacatgggtct
attgcggggtcacgaatgggggagaggagggctactccattcttgagcggcgagaggact
gaaaataggctgaagaagccaacaacatttgtatgcaagttgaaatttcggaatgaactt
ccagatccaagtgcacagccaaagctcatgtctttgaagaaagacaaagatcaatataca
aaatacacaataacatcgctggagaaaacatacaagcccaagctttttgttgagccagat
cttgggatacctcttgatctgcttgacctcagtgtatacaatcctccaagtgttagacca
ccccttgctttggaagatgaggaattattgcgggatgatgtagcagcaacccctgtgaaa
aagaatggcatcagaagaaaagagcggcctaccgataaaggggttgcatggctggttaaa
acacaatatatatctcctattagcatggactctgcgagacagtctttaactgaaaaacaa
gcaaaggaactccgggaaatgaagggaggtcgcaacattttggacaaccttaatgacagg
gaaagacaaatcaaggaaattgaggcatcatttgaggcctgcaagtcacgccctgtttat
gcaaccaataagaatttataccctgttgaggttctacctctgttgcctgattttgagcgg
tatgaagaccaatttgtccttgcagcatttgatggtgctcctactgctgattcagaaatc
tacagcaaattggaccagtccggtcatgacgcttatgaatcaagagccattatgaaaagt
tacaaggtaacaggcgcagatccagctaatccggagaaatttttggcttacatggtccct
tcgccaaatgagctatcaaaagatccttatgatgaatctgaagatgtttcttattcttgg
gttcgcgagtatcattacgatgtaagaggtgatgatgtgcatgatcccacaacatacctt
gtttcatttgatgaagaagaagcacgctatgcgccccttcccacaaagcttgtcttaagg
aaaaagaggtccaaagagggaaaaaccagtgatgaggttgagcattttcccgcaccctca
agagtgactgtcaggcagagatccactgttgctgcaattgaactaaaggattcaggggat
tattcaaggggatctgtgtcaaatttgaaaacaagacgctttgatgttgaagataccctt
gaaagaccacggaaaatttcacgacaccaagatattgatgaatatagtggtgctgaagat
gatttatctgattaa
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