KEGG T03196: 103322734

Prunus mume (Japanese apricot): 103322734

Entry

103322734         CDS       T03196

Name

(RefSeq) E3 ubiquitin-protein ligase RNF4-like

K22651

E3 ubiquitin-protein ligase RNF4 [EC:2.3.2.27]

Organism

pmum Prunus mume (Japanese apricot)

Brite

KEGG Orthology (KO) [BR:pmum00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pmum04121]
    103322734
Enzymes [BR:pmum01000]
2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     103322734
Ubiquitin system [BR:pmum04121]
Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    103322734

SSDB

Motif

Pfam:

zf-C3HC4_2 zf-RING_2 zf-C3HC4 zf-C3HC4_3 zf-RING_5 zf-RING_UBOX zf-C3HC4_4 zf-rbx1 RING_XB3-XBAT31 zf-RING_10 Prok-RING_4 zf-RING_4 Rtf2 zf-Nse zf-ANAPC11 zf-RING_6 Zn_ribbon_6

Other DBs

NCBI-GeneID:

103322734

NCBI-ProteinID:

XP_016647107

LinkDB

Position

LG2:complement(29138018..29140609)

AA seq 217 aa
MSIEGSSEFQRWNVRDVAMGRIIDLDLNYPPPNENMALTGPLGLQVQGIGHYQGQATAAA
DFVDDEVVIISPRKFAEATNNSRRNPSRRSRRVIEGLSEELANFRAFSQLGASNWEVSVN
VDVRNKPEDTVHNKPEYTATNVPVPPVVPQSEFLPEAPGFTCAICIGQLIEETSTKCGHI
FCKKCIEKAIATQHKCPTCRHKLRKRDILRIYLPNSS

NT seq 654 nt +upstreamnt +downstreamnt
atgagcatagaaggatctagtgaatttcaacggtggaatgtgagagatgttgcaatggga
aggataatagatttggaccttaattatccgcctcctaatgagaacatggctctaactggt
cccttgggactacaagttcaaggaattgggcattatcaaggacaagctacagctgctgcg
gattttgtggatgatgaagttgttataatctcaccaaggaaatttgcagaagccacgaat
aattcacgacgaaatccttctcggagaagccgtagagtcatagaaggtctttctgaagaa
ttggcaaatttccgtgcctttagccaacttggagcttccaactgggaggtttcggtcaat
gttgatgttcgtaacaaaccagaggatactgtgcataacaaaccagaatatactgcaact
aacgttcccgtgcctccagttgtgccccagagtgagttcctgccagaggcacctggtttc
acttgtgccatctgcataggccagttgattgaagaaacatcgacaaagtgtggtcacatc
ttctgcaagaagtgcattgagaaagccatagctactcaacacaaatgccctacctgcagg
cataaacttagaaagcgagatatcctcaggatctaccttccaaacagcagttaa

DBGET integrated database retrieval system