Prunus mume (Japanese apricot): 103322791
Help
Entry
103322791 CDS
T03196
Name
(RefSeq) long chain acyl-CoA synthetase 6, peroxisomal
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum00061
Fatty acid biosynthesis
pmum00071
Fatty acid degradation
pmum01100
Metabolic pathways
pmum01212
Fatty acid metabolism
pmum04146
Peroxisome
Module
pmum_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
103322791
00071 Fatty acid degradation
103322791
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
103322791
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pmum01004
]
103322791
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pmum04147
]
103322791
Enzymes [BR:
pmum01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
103322791
Lipid biosynthesis proteins [BR:
pmum01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
103322791
Exosome [BR:
pmum04147
]
Exosomal proteins
Exosomal proteins of breast milk
103322791
Exosomal proteins of breast cancer cells
103322791
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Slx4
Apo-VLDL-II
Motif
Other DBs
NCBI-GeneID:
103322791
NCBI-ProteinID:
XP_016647754
LinkDB
All DBs
Position
LG2:complement(29825357..29834470)
Genome browser
AA seq
697 aa
AA seq
DB search
MDSTPAQRRLQAIHGHLTTAAPDSESPLRPNLTAGEFVSEQGYSVVLPEKLQTGKWNVYR
SARSPLKLVSRFPDHPEIGTLHDTNIKMHAVDTFRDYKYLGTRIRVDGTVGEYKWMTYGE
ASTARSAIGSGLIYHGIPKGAGIGLYFINRPEWLIVDHACSAYSYISVPLYDTLGPDAVK
YIVNHAVVQVIFCAPETLNSLLSFLADIPTVRLIVVVGGIDDRIPSLPSSTGVKVVTYSK
LLSQGNSSLQPFFPPGPEDVATICYTSGTTGTPKGAVLTHGNLIANVAGATMAIKFYPSD
VYISYLPLAHIYERANQVMTVYFGVAVGFYQGDSLKLMDDMAALRPTIFCSVPRLYNRIY
AGITNAVKTSGVLRERLFNAAYNAKKQALLSGKNPSPMWDRLVFNKIKAKLGGRVRFMAS
GASPLSPDVMEFLKICIGGEVSEGYGMTETSCVISSVDGGDNLYGHVGSPNPACEIKLVD
VPEMNYTSEDQPYPRGEICVRGPIIFQGYHKDEVQTREVVDEDGWLHTGDIGLWSPGGRL
KIIDRKKNIFKLAQGEYIAPEKIENVYAKCKFVAQCFVHGDSLNSSLVAIVSVDPDVLKA
WADSEGIKYQDLGQLCNDLRARAAVLADMDAVGREAQLRGFEFVKAVTLVLEPFTIENGL
LTPTFKIKRPQAKEYFAKEISTMYSELSTSDPAPSKL
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atggattcaacgccagctcaacgtcgccttcaagccattcacggccacctcaccaccgcc
gctcccgactctgagtctcctctccggccaaacctcaccgccggcgagttcgtttccgag
caagggtacagtgtggtgcttccagagaaattacagacaggaaagtggaatgtatacaga
tctgcacgctccccattgaagcttgttagtagattccctgatcatcctgaaattggtaca
ctgcatgatacaaatatcaaaatgcacgcagttgatactttccgagattacaaatatttg
ggaacacgaattcgggttgatggaacagttggagaatacaaatggatgacatatggagaa
gcaagtactgcacggtcagcaataggttctggcctaatttatcatggaataccaaagggt
gctggcattgggttgtattttatcaacagacctgagtggctcattgttgatcatgcttgc
tctgcatattcgtacatatcagttcctttatatgacactctaggtccagatgctgtcaag
tacattgtaaatcatgctgttgtacaagttatattttgtgcgcctgaaacgttgaatagt
ttgttgagcttcttggcggatattccaactgtacgcttgattgtggttgttggcggtata
gatgatcgaataccatcacttccatcatcaactggagtgaaggttgtaacatattcaaaa
ttgcttagtcagggcaatagtagtcttcagccttttttcccaccaggaccggaagatgtt
gcaacaatatgctacacaagtggtacaactggcaccccaaagggagctgtattgacacat
ggaaacttgattgcaaatgttgctggggccactatggctatcaaattctacccgtctgac
gtctacatatcatatcttcctttggcgcatatttatgaacgtgctaaccaggtcatgaca
gtatattttggggttgctgttggattctaccaaggggatagtttgaagctaatggacgat
atggctgctctaagacctaccatcttctgcagtgttcctaggctgtataacagaatatat
gctggaattacaaatgcagtaaagacatccggtgtgctgagggagaggctatttaatgct
gcttacaatgccaagaagcaagcattattaagtggcaaaaatccatctcccatgtgggac
agattggtattcaataagataaaggctaagctaggaggacgggttcgttttatggcatca
ggtgcttcacccttgtctcctgatgtcatggaatttttgaagatatgcattggtggtgaa
gtaagtgaaggatatggaatgacggagacttcttgtgttattagttctgtggatgggggt
gacaacctatatggccatgttggctctcctaatccagcttgtgaaataaaacttgttgat
gtaccagagatgaactacacgtctgaggatcaaccctatcctcgtggtgaaatctgtgtc
aggggtcctattattttccaaggctatcataaagatgaagtgcagacgagagaagtggtc
gatgaagatggatggcttcatactggagatattgggctgtggtcaccgggaggtcgtctg
aaaatcattgataggaagaagaacattttcaagttggcacaaggagagtatatagctcca
gagaaaattgagaatgtttatgccaagtgcaagtttgttgcccagtgctttgtccatggt
gacagcctaaattcttctttggtagcaattgtgtcagttgacccagatgtcttgaaagca
tgggctgattctgaaggcattaagtatcaagatttagggcaactgtgcaatgaccttaga
gcaagggcagctgtattggctgatatggatgctgttggcagggaagctcagttgagaggt
tttgaatttgtgaaagctgtgacactggtgcttgaaccattcacgatagagaatggtctg
ctcactccaacatttaagatcaagagacctcaagcgaaggaatactttgcaaaagagata
tcaactatgtattcggagctctcgacttctgatcccgccccttcaaaactttaa
DBGET
integrated database retrieval system
